Related Issues (20)
- Error between bam and genome before extending annotations in precise locations HOT 9
- mouse data HOT 1
- Clarification on `reads` argument HOT 2
- NDR and novelTranscript columns do not exist in mcols(se) HOT 4
- Quantification of Transposable elements and/or chimeric TE-gene splice variants HOT 3
- How to use bambu in parellel on HPC clusters? HOT 1
- Error in left_join(refGeneTxMap, dplyr::rename(refGeneTxMap, newGeneId.merge = newGeneId), : This join would result in more rows than dplyr can handle. HOT 3
- multiple entries with the same exon_number for a given transcript_id HOT 1
- Use with prokaryotes to ID operons(?) HOT 2
- read assignment data clarification HOT 1
- Fusion gene analysis? HOT 6
- Bambu could not tell the gene id right from the input gtf file HOT 3
- Merging qname from BAM file to readId.x HOT 4
- Make novel GTF from single cell data using bambu HOT 1
- Differences between uniqueCounts_transcript.txt and readToTranscriptMaps HOT 4
- How to extract transcript assembled from the RNA-seq data? HOT 5
- How to improve the efficiency on a single sample? HOT 3
- inconsistent gene and transcript count HOT 2
- Transcripts identified by Bambu have a CPM or count value of 0 in all samples HOT 2
- Best minimap2 parameters for use with bambu HOT 2
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