Comments (1)
pichuan
commented on July 23, 2024
1
Hi @sssxie
Use this field:
nucleus/nucleus/protos/position.proto
Line 32 in 68d3947
For example, in DeepVariant we use the strand information as one of our channels in our representation. Here is the C++ code that reads it: https://github.com/google/deepvariant/blob/c8fae5bd5f6c587bba733d83263a694aca252098/deepvariant/pileup_image_native.cc#L296
You can access the same field in the Python code as well once you have a Read.
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