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bioinfcomp

Bioinformatics Competition code / whatever (post-completion)

bioinfscripts

Bioinformatics scripts produced over the course of my work. Now maintained on GitLab.

blogs

Random musings (mostly about bioinformatics) by David Eccles

bootstrap-subsampling

Scripts used to carry out bootstrap subsampling

catch

A package for designing compact and comprehensive capture probe sets.

colourclock

Clock application for Android using colour to tell time

concentricclock

Clock application for Android using moving concentric rings to tell time

conference-bingo

Distract yourself with a little bingo while listening attentively to the speakers

cura

This is the development version of Cura for LulzBot 3D Printers by Aleph Objects, Inc.

curaengine

Powerful, fast and robust engine for converting 3D models into g-code instructions for 3D printers. It is part of the larger open source project Cura.

dazz_db

The Dazzler Data Base

dorado

A LibTorch Basecaller for Oxford Nanopore Reads

featurecounter

ImageJ macros to help identify tumour-like areas of an image

gabohren

Visual and auditory training using Gabor patches

hacker-card

Create a card to proudly display your hacker status

infinite-z-beam

Beam designs for infinite Z 3D printers

jessyink

fork of the launchpad "jessyink" project

jmesudoyu

Sudoku program written in Java for j2me, native Java, and Android

mem

Marker Enrichment Modeling (MEM)

message-from-space

minion-user-group

Scripts for QC data analysis from the MinION User Group

mlmc

My Life, My Council

ncoc

Neutral Code of Conduct

open-scholarship-site

Website for the Open Scholarship Strategy

openscad

OpenSCAD - The Programmers Solid 3D CAD Modeller

phylotreescripts

Bioinformatics scripts for processing data based on mitochondrial mutations recorded in Phylotree

porequality

This is an early version of POREquality, an R Markdown document designed to be ran as part of a Nanopore local basecalling pipeline.

prebowt

Prefix-array Bowtie-like Transform

presentation-notes

Presentations seen and transcribed by David Eccles

prusaslicer

G-code generator for 3D printers (RepRap, Makerbot, Ultimaker etc.)