gutema2023 Goto Github PK
Name: Gutematura
Type: User
Gutematura's Projects
abritamr
A pipeline for running AMRfinderPlus and collating results into functional classes
atlas
ATLAS - Three commands to start analyzing your metagenome data
conda
OS-agnostic, system-level binary package manager and ecosystem
covid-19-app-android-ag-public
COVID19 Android app
covid-19-app-ios-beta
Source code of the Beta of the NHS COVID-19 iOS app
covid19-app-system-public
COVID19 app backend
dorado
A LibTorch Basecaller for Oxford Nanopore Reads
fieldbioinformatics
The ARTIC field bioinformatics pipeline
ilri-africa-cdc-training
A suite of pathogen genomics tutorials for the ILRI Genomics platform training programs
medaka
Sequence correction provided by ONT Research
mtbseq_source
MTBseq is an automated pipeline for mapping, variant calling and detection of resistance mediating and phylogenetic variants from illumina whole genome sequence data of Mycobacterium tuberculosis complex isolates.
training-material
A collection of Galaxy-related training material
ultraplex
Ultra-fast 5' and 3' demultiplexer
viclara
viclara is a bioinformatics analysis pipeline for classification and reference guided assembly of segmented viruses from metagenomics reads obtained on Illumina platform.
viralrecon
Assembly and intrahost/low-frequency variant calling for viral samples
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