Comments (2)
geparada
commented on September 16, 2024
Hi Charlotte,
Please check Examples/Runs/COSMIC/local_samples.tsv. There you can find an example of how this file should look like.
https://github.com/hemberg-lab/MicroExonator/blob/master/Examples/Runs/COSMIC/local_samples.tsv
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zyh4482
commented on September 16, 2024
May I ask what if it is a pair-end fastq? Would you mind providing an example for this case? Because my data are huge and collected from various sources, it is not possible to use the implemented config.py to prepare all the data. Any suggestion would be grateful!
Another question is: what should be the directory to put the local_samples.tsv file in?
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