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huizhong1993's Projects

-pytorch- icon -pytorch-

【PyTorch】手把手教你跑通第一个神经网络

10xpilot_snrnaseq-human icon 10xpilot_snrnaseq-human

10x snRNA-seq study on 5 postmortem human brain regions across the reward circuitry: NAc, AMY, sACC, DLPFC, and HPC

abrs-p icon abrs-p

Deep learning predicts sensitivity to atezolizumab-bevacizumab from digital slides of liver cancer

activedriverwgsr icon activedriverwgsr

ActiveDriverWGSR is an R package for discovery of cancer driver genes and non-coding elements in whole genome sequencing data

activepathways icon activepathways

Integrative pathway enrichment analysis of multivariate omics data

adp icon adp

Atlas of Digital Pathology for Deep Learning [CVPR2019]

angptl4 icon angptl4

This repository contains the code (but not the data) to reproduce the manuscript : "Impact of loss-of-function in angiopoetien-like 4 on the human phenome".

annotated_deep_learning_paper_implementations icon annotated_deep_learning_paper_implementations

🧑‍🏫 60 Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, sophia, ...), gans(cyclegan, stylegan2, ...), 🎮 reinforcement learning (ppo, dqn), capsnet, distillation, ... 🧠

apoc3_project icon apoc3_project

This repository contains the code (but not the data) to reproduce the manuscript : "Drug target Mendelian randomization supports apolipoprotein C3-lowering for lipoprotein-lipid levels reductions and cardiovascular diseases prevention".

awesome-single-cell icon awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

bc_imaging icon bc_imaging

Deep-learning and transfer learning identify new breast cancer survival subtypes from single-cell imaging data

beyondcell icon beyondcell

Beyondcell is a computational methodology for identifying tumour cell subpopulations with distinct drug responses in single-cell RNA-seq and Spatial Transcriptomics data.

bioworkflows icon bioworkflows

In-house computational biology workflows at Columbia Neurology

bioxelnodes icon bioxelnodes

For scientific volumetric data visualization in Blender.

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