Hwang Lab's Projects
Multi-omics Reveals Microbiome, Host Gene Expression, and Immune Landscape in Gastric Carcinogenesis
DNA methylation regulates alternative polyadenylation via CTCF and the cohesin complex (2019 paper submission)
Cleveland Clinic Bioinformatics Workshop January 2018
Database generating source codes for CRISPinatoR
Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data
Integrative Spatial Analysis of H&E and IHC Images Identifies Prognostic Immune Subtypes correlated with Progression Free Survival in HPV-Related Oropharyngeal Squamous Cell Carcinoma
TIGIT dysfunction role in CD19 CAR-T therapy for NHL
NTriPath Matlab code
Precision HLA typing from next-generation sequencing data
tutorials for wsi analysis by Hongming Xu
Cleveland Clinic Bioinformatics Workshop for RNA-Seq data analysis
single cell sequencing analysis tutorial
TCGA prostate cancer Gleason score prediction using completed and statistical local binary patterns (Matlab/Python programs)
TCGA BLCA tmb prediction by Hongming Xu
Pan-cancer tils analysis study by Hongming Xu
Tools for dividing pathology whole slide images into tiles and save them as individual files.