Comments (1)
This works, you just run:
sudo python setup.py install
from arc.
Related Issues (20)
- Enable simple repeat screening on iteration 1 HOT 1
- Add the ability to use high-specificity search on the first iteration HOT 1
- Biopython method is deprecated HOT 3
- Allow alternative working folder HOT 1
- Speed up SPAdes HOT 2
- Improve speed and reduce disk IO for read recruitment
- Reduce disk space requirements when using bowtie2 HOT 4
- "KeyError" on failed target assembly after previous iteration killed for that target HOT 3
- Do a better job of detecting corrupted read indexes HOT 1
- enhancement request to deal with unusual read names in SRA datasets (causes KeyError termination) HOT 11
- Indexing is really slow.
- Bug with read recruitment when targets have an ARC-like name HOT 1
- ARC doesn't properly detect missing PE files HOT 1
- ARC parameter parsing assumes parameters that start with a number are numeric HOT 2
- Make a 1.1.3 release HOT 1
- How to set kmer value of spades in ARC config file? HOT 2
- Retain Fastg output from Spades HOT 1
- In some rare cases, ARC thinks no reads have been recruited despite successful mapping
- while Patching BLAT,there is nothing /bin/x86_64 folder.
- the contigs.fasta is empty
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from arc.