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icebert avatar icebert commented on June 11, 2024

Hi Vijay,

I also encountered this situation occasionally before. Usually this is caused by a single or several query sequences taking too much time to align. So other threads are finished, but the thread that contains such sequence(s) still takes a lot of time to finish. Increase nodes/cores wouldn't help, because the total run time is determined by the ultra time-consuming sequence(s).

Happy new year!

Meng

from pblat-cluster.

vijay-naidu avatar vijay-naidu commented on June 11, 2024

Meng, thanks for getting back to me. This makes sense.
Happy new year to you too!!

Best Wishes,
Vijay

from pblat-cluster.

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