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Name: Igor Hut
Type: User
Name: Igor Hut
Type: User
Copies of notebooks used in the practical sessions for Algorithms for DNA Sequencing
Slides for Algorithms for DNA Sequencing Coursera class
My solutions to problems from ROSALIND, Project Euler, and courses I have taken. This includes my own implementations of various data structures.
An adaptive network-based fuzzy inference system (ANFIS) for Breast Cancer Classification
Executable R script for ASE with MBASED
An awesome R-shiny list!
Bioconductor package "ballgown", devel version. Isoform-level differential expression analysis in R.
analysis code used in Ballgown paper
Bash Oneliner will focus on bash commands for parsing plain text and biological data, which usually are tsv files(tab-separated values); some of the commands are for Ubuntu system maintaining. I apologize that there won't be any citation of the code, but they are probably from dear Google and Stackoverflow. Not all the code here are oneliner (if the ';' counts..). English and bash are not my first language, so... correct me anytime, tks!!
Supplementary files for my book, "Bioinformatics Data Skills"
Repo for the first course in Bioinformatics Specialization by UCSD - Finding Hidden Messages in DNA (Bioinformatics I)
Package an R workspace and all dependencies as a Docker container
Bioinformatics containers
Solutions to Algorithms for DNA Sequencing
Repo for Coursera Statistical Inference course
Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1
Capstone Project for Johns Hopkins University's Data Science Specialization on Coursera.org
Compiled Notes for all 9 courses in the Coursera Data Science Specialization
http://DataScienceSpecialization.github.io
The Leek group guide to data sharing
Repo for DDP by Coursera
Repo containing simple Shiny app as a final project for DDP course by John Hopkins and Coursera
A collaboratively written review paper on deep learning, genomics, and precision medicine
neuralnetworksanddeeplearning.com integrated scripts for Python 3.5.2 and Theano with CUDA support
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
Developing Data Products Course from the Johns Hopkins Data Science Lab
A toolkit to learn how to model and interpret regulatory sequence data using deep learning.
ELANFIS ( Extreme Learning Adaptive Neuro-Fuzzy Inference System)
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.