imagingdatacommons Goto Github PK

aws_etl

Code to transfer IDC image files from Google Cloud Storage to AWS S3 (CORE REPO)

cloudfunctions

(CORE REPO)

cloudsegmentator

Medical imaging segmentation workflows for FireCloud (Terra) and Seven Bridges Cancer Genomics Cloud

crdc_compound_objects

dcm-docbook-tools

dcmqi-python-distributions

dicom-microscopy-viewer

Web-based DICOM slide microscopy viewer library

dicom-wg26-connectathon-2024-consumer-tasks

Source code for the IDC's entry into the 2024 DICOM Working Group 26's connectathon as the "consumer" role

dicomslide

Python library for reading whole slide images in DICOM format

dicomweb-client

Python client for DICOMweb RESTful services

etl

(CORE REPO)

etl_flow

(CORE REPO)

github_analytics

Scripts for monitoring and archival of GitHub insights for IDC-related repositories

highdicom

High-level DICOM abstractions for the Python programming language

idc-admin

Scripts to help in project admin (CORE REPO)

idc-api

Google Endpoints API providing programmatic access (CORE REPO)

idc-common

Shared code between repositories (CORE REPO)

idc-comppath-reproducibility

Classification of lung tumor slide images with the NCI Imaging Data Commons

idc-cron

Cron jobs run for IDC monitoring (CORE REPO)

idc-docs

Source for IDC documentation

idc-index

Python package to simplify access to the data available from NCI Imaging Data Commons

idc-index-data

Python package providing the index to query and download data hosted by the NCI Imaging Data Commons

idc-pathomics-use-case-1

Initial IDC pathomics use case implementation

idc-prostate-mri-analysis

idc-radiomics-reproducibility

Transparent and Reproducible AI-based Medical Imaging Pipelines Using the Cloud.

idc-slim

Interoperable slide microscopy viewer for thin clients (CORE REPO)

idc-sm-annotations-conversion

idc-tutorials

idc-vertebrae-ct-segmentation

idc-viewer-support

Resources to support OHIF Deployment