Comments (6)
I have tested some of these URLs and this issue seems to be resolved now.
from clockwork.
If those URLs ever worked they not working now... It is causing my build to fail.
from clockwork.
Any Idea @mbhall88?
from clockwork.
Sorry, not sure what to say because I can't reproduce it. @pr0xxy can you confirm if this fails for you?
$ wget ftp://public-ftp.hmpdacc.org/HMBSA/Tongue_dorsum.tar.bz2
--2019-08-13 18:26:43-- ftp://public-ftp.hmpdacc.org/HMBSA/Tongue_dorsum.tar.bz2
=> ‘Tongue_dorsum.tar.bz2’
Resolving public-ftp.hmpdacc.org (public-ftp.hmpdacc.org)... 134.192.125.24
Connecting to public-ftp.hmpdacc.org (public-ftp.hmpdacc.org)|134.192.125.24|:21... connected.
Logging in as anonymous ... Logged in!
==> SYST ... done. ==> PWD ... done.
==> TYPE I ... done. ==> CWD (1) /HMBSA ... done.
==> SIZE Tongue_dorsum.tar.bz2 ... 99564303
==> PASV ... done. ==> RETR Tongue_dorsum.tar.bz2 ... done.
Length: 99564303 (95M) (unauthoritative)
Tongue_dorsum.tar.bz2 100%[=====================================================================================>] 94.95M 1008KB/s in 80s
2019-08-13 18:28:04 (1.19 MB/s) - ‘Tongue_dorsum.tar.bz2’ saved [99564303]
from clockwork.
Any Idea @mbhall88?
As per #49 (comment) I am able to download the provided example.
@pr0xxy are you able to provide an example of the error log so we can see whether it is a specific one of the URLs that is failing.
from clockwork.
The URLs are all updated in release 0.7.8, so should work now
https://github.com/iqbal-lab-org/clockwork/releases/tag/v0.7.8
Note that the download of these genomes is now separated from the singularity build.
from clockwork.
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