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Jade Shi's Projects

deepchem icon deepchem

Deep-learning models for Drug Discovery and Quantum Chemistry

directional-gini icon directional-gini

Modified Gini importance with direction of correlation information between feature and model prediction

msmbuilder icon msmbuilder

Extensible software for building Markov State Models for Biomolecular Conformational Dynamics

nma icon nma

Normal Mode Analysis for Macromolecules

odin icon odin

Structure determination from solution-phase experiments.

openmm icon openmm

OpenMM is a toolkit for molecular simulation using high performance GPU code.

smfret icon smfret

Code for computing theoretical single-molecule FRET efficiency histograms from simulated protein conformations.

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