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Jakob's Projects

bradiplus icon bradiplus

BraDiPluS (Braille Display Plugs Data Analysis) is an R package to process and analyse data produced using the microfluidic platform for functional drug screening of patient biopsies developed in collaboration with Merten group (EMBL).

mefisto_analyses icon mefisto_analyses

Repository containing the code to reproduce the analyses contained in the MEFISTO manuscript

phava icon phava

Adapting the phasefinder approach for identifying phase variation to long reads

pypath icon pypath

python module for signaling pathways analysis accompanying OmniPath

zinq-v2 icon zinq-v2

Powerful and robust non-parametric association testing for microbiome data via a zero-inflated quantile approach

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