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anki-chess-2.0

An interactive chess template for anki.

axonem-challenge

utility code for AxonEM challenge

better-vim-tmux-resizer

Resize tmux panes and Vim windows with ease

cellpose

a generalist algorithm for cellular segmentation with human-in-the-loop capabilities

chunkpipeline

cloud-volume

Read and write Neuroglancer datasets programmatically.

counter

d3dnet

Repository for "Deformable 3D Convolution for Video Super-Resolution", SPL, 2020

dask

Parallel computing with task scheduling

dask-jobqueue

Deploy Dask on job schedulers like PBS, SLURM, and SGE

dgcnn.pytorch

A PyTorch implementation of Dynamic Graph CNN for Learning on Point Clouds (DGCNN)

differentiable-particle-filters

Source code and data for the paper "Differentiable Particle Filters: End-to-End Learning with Algorithmic Priors"

distributed

A distributed task scheduler for Dask

distrobox_dotfiles

draco

Draco is a library for compressing and decompressing 3D geometric meshes and point clouds. It is intended to improve the storage and transmission of 3D graphics.

euclidean-distance-transform-3d

Euclidean distance transform for multi-label 3D anisotropic images using marching parabolas.

flyboy

a lightweight ChatGPT plugin for neovim

funlib.evaluate

fzf

:cherry_blossom: A command-line fuzzy finder

fzf-z

Plugin for zsh to integrate fzf and various 'frecency' plugins, including z.sh - enables easy switching between recent dirs in zsh

igneous

Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.

images

Community maintained container images to use with toolbx (and distrobox)

imutil

toolbox utility functions

jasonkena.github.io

jasonkena_cv

My CV written using jinja2 to render yaml as LaTeX

kimimaro

Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)

l1-skeleton

larvae

Larvae annotation files

larvaepics

m2cgen

Transform ML models into a native code (Java, C, Python, Go, JavaScript, Visual Basic, C#, R, PowerShell, PHP, Dart, Haskell, Ruby) with zero dependencies