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followers: 60.0 following: 27.0 repos: 177.0 gists: 74.0

Name: Jay R Bolton

Type: User

Company: Karius

Bio: :bike: :bike: :bike: :bike: :bike: :bike: :bike: :bike:

Location: Bay Area, CA

Blog: http://www.jayrbolton.com

Hello:grey_exclamation:

I am a software engineer living in Oakland, CA with interests in computational biology, creative coding, and sharing knowledge.

I currently work on infrastructure for genomics data analysis at Karius Diagnostics.

I've been spending some free time solving Rosalind bioinformatics problems and writing a small puzzle game in Unity involving cats.

Lately I've enjoyed programming in Rust and C!

Other projects:

Polygram for interactively generating mathematical animations
Monkeypatch CMS for live editing web pages
A COVID-19 Dashboard for tracking US and worldwide growth
1d Cellular Automata simulator in javascript
Dontdie - a sass startup runway calculator view
Linear partitioning algorithm in javascript
Hadrosaur is a Python library for managing large amounts of computed files
Brontosaurus is a Python library for creating JSON RPC APIs
Smooth scrolling library in javascript
browserify-crawl and postcss-walk
ordered-hash data structure for javascript
Some flyd (functional reactive programming) libraries such as flyd-crud, flyd-undo, flyd-ajax, and others
Langton's Ant in Python
I worked for 6 years on a startup called CommitChange which lives on as OSS called Houdini
I helped create RallyStarter
I did a little work with Dat Project, a very cool P2P framework

Some incomplete projects that I may return to:

dat-wot is a WIP p2p cryptographic communication library for Node
Ukkonen's Algorithm in Node

Jay R Bolton's Projects

kb_msuite

kb_sdk

Build and test new Apps for the KBase platorm

kb_sdk_docs

KBase SDK Documentation

kb_tophat2

kelvinh.github.com

my personal site managed by org-page

lambada

interactive programming WIP

langtonsant

Langton's Ant implemented in Python and OpenGL

linear-partitioning

Linear partitioning in straight up javascript.

literate-json

More readable & writeable JSON documents

megahit

Ultra-fast and memory-efficient (meta-)genome assembler

mirror-folder

Small module to mirror a folder to another folder. Supports live mode as well.

mock_microservice

Tiny docker-based micro JSON API for mocking in tests

monkeypatch-cms

A website editor for lazy devs

narrative

net-utils

KBase NetUtils

netlogo

turtles, patches, and links for kids, teachers, and scientists

newkbasedevelopers

KBase_Developer_FAQ

njs_wrapper

Service for wrapping Narrative Job Service with additional functionality

node-fragment-stitcher

Given a set of randomly ordered, url-encoded text fragments with prefix/suffix overlap, stitch them back together in the right order without overlap

node-heap

Heap data structures for nodejs and the browser

node-init-project

Simple script to start a new npm module

node-insertion-sort

Insertion sort implementation

node-merge-sort

Implementation of merge sort for node.js

node-suffix-tree

Efficient suffix trees with Ukkonen's algorithm in nodejs

node-wot

Web of trust, friend-to-friend networking crypto modules for use with Dat

nwb-schema

Data format specification schema for the NWB:N format

object-conduit

Compose functions that take and return objects by continuously merging

ontology_api

openapi-specification

The OpenAPI Specification Repository

opengovernment

OpenGovernment -- a project of the Participatory Politics Foundation

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