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2p_roi_analysis

allen-neuropixel-analysis

am226_ring_attractor

auxrl

Predictive auxiliary tasks in Deep RL as a model of hippocampal representation learning

caiman

Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

deeplabcut

Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals incl. humans

diffusionfromscratch

Rebuild the Stable Diffusion Model in a single python script. Tutorial for Harvard ML from Scratch Series

fly_connectome

harvard_am205

mamba_small_bench

Trying out the Mamba architecture on small examples (cifar-10, shakespeare char level etc.)

mathvista

MathVista: data, code, and evaluation for Mathematical Reasoning in Visual Contexts

mit6.484

Code for MIT sensory motor learning homework and project

neural_decoding

A python package that includes many methods for decoding neural activity

neurogym

A curated collection of neuroscience tasks with a common interface.

node_perturbation

notionarxivchat-cli

A few CLI tools to immersively, browse, read Arxiv paper, save to notion, chat with them and save the chat history

plumetracknets

Supplementary data and code accompanying: https://arxiv.org/abs/2109.12434

suite_2p_analysis

thesis-2p-behavior-align

transformerfromscratch

Tutorial for Harvard Medical School ML from Scratch Series: Transformer from Scratch. Demo the usage of transformer in various domains: Music sheet, audio signal, image generation & discrimination

workingwithresearchcode