Comments (3)
jlmelville
commented on June 16, 2024
My thoughts are: I completely overlooked this as a possible way of doing things (the increasingly horrid rat's nest of logic for all the possible ways to provide data to umap and umap_transform is a stellar example of how not to program a computer). Sorry for breaking this, and thank you for not only reporting it, but working out what the problem was. The error message was completely useless too, so whatever the opposite of kudos is to me all round.
I think this is now fixed on the master branch. There will be a new submission to CRAN as soon as I also complete #96 (which should mean that I don't have to wait a couple of months before my next submission).
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jlmelville
commented on June 16, 2024
@AustinHartman version 0.1.14 of uwot is now on CRAN and should contain this fix.
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AustinHartman
commented on June 16, 2024
Great, this resolves my issue. Thank you for such a fast fix!
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Related Issues (20)
- Test failure an arm64, ppc64el and s390x HOT 8
- Add general_simplicial_set_intersection to the uwot API HOT 3
- umap_transform causes R Studio to abort (R encountered a fatal error.) HOT 4
- umap_transform can give odd results with dens_scale HOT 17
- umap transform fuzzy graph HOT 3
- Citing {uwot} HOT 1
- Weird looking UMAP for spectral flow data HOT 3
- What C++ version should CXX_STD have? HOT 16
- devtools can no longer build uwot on Windows HOT 5
- I can not load the saved model, an example from the help HOT 9
- Reproducibility issue with the same data and OS HOT 17
- umap_transform with seurat umap coordinate HOT 2
- dgCMatrix_colSums' not found error when using a binary matrix HOT 2
- irlba as_cholmod_sparse problems HOT 1
- maybe unintended data use in examples HOT 2
- umap_transform uses a different distance metric if loaded in HOT 5
- `fuzzy_simplicial_set()` for BBKNN HOT 5
- How to input similarity_graph back into umap parameters? HOT 3
- Range scale input before optimization HOT 2
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