jnpaulson Goto Github PK

2016

Course material for BIO 260 and CSCI E-107 in Spring 2016

american-gut

American Gut open-access data and IPython notebooks

biocworkshops

Workshops for learning Bioconductor

biom

Development version of the biom package for R

biom-format

The Biological Observation Matrix (BIOM) Format Project

biomformat

Support for the biom file format in R/Bioconductor, versions 1.x (JSON) as well as 2.x (HDF5)

biomformat-1

blca

countclust

A R package for Grade of Membership model and Visualization of counts data:

courses-harvardx-ids-mod-2

datasciencefinalproject

BIO260 Final Project

dcmetrometrics

DC Metro Metrics is a project dedicated to collecting and sharing publicly available data related to the DC WMATA Metrorail system.

dt

R Interface to the jQuery Plug-in DataTables

epivizr

Devel branch of epivizr bioconductor package

fastqctheoreticalgc

R package for generating theoretical GC content curves for the FASTQC module

gamerank

greengenes13.5mgdb

healthvis

helpmeviz-malnutrition

HelpMeViz Hackathon - 2014/06/28

htsapp

high-throughput sequencing shiny apps to visualize your dataset(s)

humanzee

Tools for statistical analysis of genomics data

introdatasci

krona

Interactively explore metagenomes and more from a web browser.

metagenomefeatures

R package for annotating metagenomic datasets with taxonomic information

metagenomeseq

Statistical analysis for sparse high-throughput sequencing

methylflow

Cell-specific methylation pattern reconstruction

msd1000

Visualization of the microbiome of children from low-income countries

musicwriters

Analysis of network of writers in the music industry over the last forty years.

nosson.github.io

Website

nutrition_indicators

Freely available datasets for the "Exposing Hidden Hunger" 2015 HelpMeViz Vizathon