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benchmark_rsfmri_prediction

Minimal scripts available for predictions on multiple datasets

bids-starter-kit

Collection of tutorials, wikis, and templates to get you started with creating BIDS compliant datasets

brain-atlas

various scripts to work with Andreas' brain atlas

cogspaces

Multi-study decoding models for task functional MRI data.

data-processing

Scripts for resting state (rs) fMRI data processing scripts

difumo

Dictionary of Functional Modes for brain imaging

difumo_analysis_scripts

Fine-grain atlases of functional modes for fMRI analysis

empirical_proxy_measures

Beyond brain age: Empirically-derived proxy measures of mental health.

fastsurfer

PyTorch implementation of FastSurferCNN

fitlins

Fit Linear Models to BIDS Datasets

hypergale

kamalakerdadi.github.io

mindboggle

Automated anatomical brain label/shape analysis software (+ website)

mne-python

MNE : Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python

modl

Randomized online matrix factorization

narps-1

Code related to Neuroimaging Analysis Replication and Prediction Study

nilearn

Machine learning for NeuroImaging in Python

nilearn-feedstock

A conda-smithy repository for nilearn.

nilearn_sandbox

Playground for nilearn compatible features.

nilearn_task_networks

Tutorials for task-based activation and network analysis using Python based modules: Nilearn and Nistats. Notebooks prepared on Neurohackademy 2018 (http://neurohackademy.org/).

nistats

Modeling and statistical inference on fMRI data in Python

notes

An ever-evolving set of Python scripts for keeping track of Markdown-based notes.

public_analysis_code

Public analysis code for the IBC project

pypreprocess

Preprocessing scripts for neuro imaging

resting_state_sandbox

scikit-learn

scikit-learn: machine learning in Python

stacked-learn

A scikit-learn based library for prediction stacking.

tutorial

Nilearn tutorials on Neuroimaging data

vim-flake8

Flake8 plugin for Vim

vim-pathogen

pathogen.vim: manage your runtimepath