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Kyle Johnsen's Projects

adv-r icon adv-r

Advanced R programming: a book

beweisen icon beweisen

Investigating biological significance of bubbles resulting from Kleuren pan-genome CdBG

biocstyle icon biocstyle

Issues and pull requests for BiocStyle should go here.

brian2 icon brian2

Brian is a free, open source simulator for spiking neural networks.

cs478 icon cs478

Python port of machine learning toolkit for BYU CS 478 (Winter 2015)

heman icon heman

vim color theme inspired by the 90es

ivdiag icon ivdiag

IV diagnostics package accompanying Lal, Lockhart, Xu, and Zu (2023).

latex2markdown icon latex2markdown

An AMS-LaTeX compatible converter that maps a subset of LaTeX to Markdown/MathJaX.

lds-ctrl-est icon lds-ctrl-est

A C++ library for estimation and control of linear dynamical systems (LDS) with Gaussian or Poisson observations.

magic_dodgeball icon magic_dodgeball

A simple game made for teaching basic programming--learners program their own magic throws

multifastats icon multifastats

Multifastats: Multi-Fasta Sequence Stats. Free python-based program that, from a set of a set of 'fasta' sequences (as group or individually), produces basic outputs and statistics (N50, %GC, molecular weight, cut in kmers and concatenate sequences using defined spacers). And also allows to apply some filters and select subgroups by length and/or type. This runs in Windows, Linux and Mac OS.

python-neo icon python-neo

Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats

sqlstyle.guide icon sqlstyle.guide

A consistent code style guide for SQL to ensure legible and maintainable projects

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