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admin_tools

Repo to hold various admin tools and utiliites.

arast_sdk

assembly

An extensible framework for genome assembly.

auth

authentication services for kbase

auth2

KBase authentication server MKII

awe

workflow and resource management system for bioinformatics data analysis

awe_service

The awe_service repository provides KBase release engineering tools for the deployment of the AWE client and server. The AWE repository is included as a submodule in the awe_service repository and is maintained at http://github.com/MG-RAST/AWE.

biochemistryapi

blobstore

Simple S3 backed file storage.

bootstrap

catalog

A dynamic catalog of KBase functionality that can also build/deploy modules automatically

check_mk

check_mk local plugin scripts.

condor

KBase specific Condor scheduler image

contigfilter

contigfilter

contigfilternew

A KBase SDK example module

data_api

Towards a unified data api for KBase

data_api_perl_clients

Perl clients for the KBase Data API services

data_import_export

deploy_dev

Tools for deploying a KBase development environment in docker containers

deploy_tools

deploy_tools

gene_families

genome_comparison

handle_mngr

Provides user access capabilities to handles.

handle_service

An application programming interface for managing files. This service provides an AbstractHandle that can be used to reference data in different stores. This deploys both the client and service.

handle_service2

Handle Service Version 2

jars

Common Java jar files needed across KBase

k8s101

Kubernetes 101 workshop

kbase-ui

kbase-ui components

kbase_base

KBase Base Docker Image

kbasesearchengine