knokknok Goto Github PK
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knokknok's Projects
annotationforge
Tools for building SQLite-based annotation data packages
better-defaults
A small number of better defaults for Emacs
config
My configuration files.
dna-seq-gatk-variant-calling
This Snakemake pipeline implements the GATK best-practices workflow
dplyr
Plyr specialised for data frames: faster & with remote datastores
ggrepel
:round_pushpin: Repel overlapping text labels away from each other.
knitr
A general-purpose tool for dynamic report generation in R
mgsa-bioc
Mirror of the mgsa Bioconductor package (https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/mgsa) with full history
pheatmap
Pretty heatmaps
rsqlite
R interface for SQLite
salmon
🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using lightweight alignments
snakemake-wrappers
This is the development home of the Snakemake wrapper repository, see
star
RNA-seq aligner
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