kochtobi Goto Github PK

advent-of-code-2023

Trying out the Kotlin language with adven to of code

adventofcode2022

aws-genomics-workflows

Genomics Workflows on AWS

configs

Config files used to define parameters specific to compute environments at different Institutions.

drawio-github

Drawio GitHub Integration

gildedrose

Java version of the GildedRose code kata (from: http://www.iamnotmyself.com/2011/02/13/RefactorThisTheGildedRoseKata.aspx)

hlatyping

Precision HLA typing from next-generation sequencing data

jekyll-docker

This repository contains a Dockerfile which creates a docker image that can be used to run a local webserver for github pages. Customized version of https://github.com/envygeeks/jekyll-docker

jira-integration-test

kata-trivia-java

kochtobi

kochtobi.github.io

learningintellij

A project to check out and play around with

mag

Assembly and binning of metagenomes

master-supplementary

Supplementary material for the master thesis.

memento-example

nextflow

A DSL for data-driven computational pipelines

openbis-api-test

Test some code related with the V3 API of openbis

rnaseq

RNA sequencing analysis pipeline using STAR or HISAT2, with gene counts and quality control

sarek

Detect germline or somatic variants from normal or tumour/normal whole-genome sequencing data

test-datasets

Test data to be used for automated testing with the nf-core pipelines

tools

Python package with helper tools for the nf-core community.

utils

A repository containing helpful code snippets and stuff

youtrack-integration-test