krosenfeld-idm Goto Github PK

abc-sysbio

agents.jl

Agent-based modeling framework in Julia

agentsexamplezoo.jl

Examples written with Agents.jl

antibody-dynamics-against-measles

benchmarks

This repository hosts stand-alone reference problems for benchmarking of UQ algorithms.

campaign_timing

A time series model for forecasting measles vaccination campaign impact

canonicalpathtools

Python tools for analysis from "Measles and the canonical path for elimination" (Graham et al., 2019, Science)

cartopynb

docker container for cartopy projects

composable-sandbox

Sandbox for composition vs configuration discussion

conformalllm

Extending Conformal Prediction to LLMs

cookiecutter-docker-jupyter

corvid

SARS-CoV-2 (COVID 2019) epidemic model

covasim_foi_demo

COVID-19 Agent-based Simulator (Covasim): a model for exploring coronavirus dynamics and interventions

covid-19

Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE

covid-20

covidrtpcr

Analysis of RT-PCR sensitivity by day since exposure or symptom onset

dynamice

DynaMICE (Dynamic Measles Immunisation Calculation Engine)

emod-generic-scripts

Demonstration simulations using Generic-Ongoing branch of EMOD

emodpy_measles_sandbox

epifilter

Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional approaches

epipack-spatial-demo

example-hosted-docker

Example of how to generate and access on COMPS a Docker container that gets hosted on the IDM artifactory

example-vscode-r-extension

Example and .devcontainer using the VSCode R extension

feeling-responsive

»Feeling Responsive« is a free flexible theme for Jekyll built on Foundation framework. You can use it for your company site, as a portfolio or as a blog.

github-copilot-fundamentals-100

Github copilo tutorial (100)

gpt-repository-loader

Convert code repos into an LLM prompt-friendly format. Mostly built by GPT-4.

hmer

An R package for Bayes Linear emulation and history matching.

hmer-examples

Examples and exploratory space for HMER

huggingface-nlp-tutorial

Following the huggingface NLP course

idmtools