kuleshov Goto Github PK

architect

Scaffolding genomes using synthetic long read clouds

audio-super-res

Audio super resolution using neural networks

cdhit

Automatically exported from code.google.com/p/cdhit

convolutional-draw

Tensorflow implementation of Convolutional DRAW by Gregor et al. (2016)

cornell-cs5785-2020-applied-ml

Teaching materials for the applied machine learning course at Cornell Tech (online edition)

cornell-cs5785-2023-applied-ml

Lecture materials for Cornell CS5785 Applied Machine Learning (Fall 2023)

cs228-notes

Lecture notes on probabilistic graphical modeling, based on Stanford CS228 (work in progress!)

deconvolution

deep-hybrid-models

Deep hybrid models: bridging discriminative and generative approaches https://cs.stanford.edu/~ermon/papers/uai2017_cr.pdf

deep-learning-models

Implementations of popular deep learning models in Theano+Lasagne

dotfiles

generalized-rayleigh-quotient

Fast algorithms for sparse principal component analysis

glow-experiments

glow-pytorch

Simple, extendable, easy to understand Glow implementation in PyTorch

gwaskb

Machine-curated database of genetic disease and genome-wide association studies

improved-gan

code for the paper "Improved Techniques for Training GANs"

lens

Variant calling and haplotyping algorithm optimized for synthetic long reads

minillm

MiniLLM is a minimal system for running modern LLMs on consumer-grade GPUs

mm-experiment

multivariate-deep-learning

nanoscope

Metagenomic analysis pipeline aimed at synthetic long reads

neural-variational-inference

Neural variational inference and learning in undirected graphical models http://www.stanford.edu/~kuleshov/papers/nips2017.pdf

neuralrandomfieldlearning

http://web.stanford.edu/~kuleshov/papers/iclr2016.pdf

online-learning

A few basic online learning algorithms

pixelcnn-pp-experiments

prism

Statistical phasing software for long read data

probhap

Probabilistic single-individual haplotyping

refdb

Stores paper references, outputs to bib/html, does basic sanity checking on bib entries

scripts

Various short scripts I wrote for my work

snorkel

A lightweight platform for developing information extraction systems using data programming