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Name: Kiran V Garimella
Type: User
Company: Broad Institute
Bio: Computational scientist working at the Broad Institute on long read methods development.
Location: Cambridge, MA
Name: Kiran V Garimella
Type: User
Company: Broad Institute
Bio: Computational scientist working at the Broad Institute on long read methods development.
Location: Cambridge, MA
Analysis workflows for AoU long reads
:pencil: Markdown code for lots of small badges :ribbon: :pushpin: (shields.io, forthebadge.com etc) :sunglasses:. Contributions are welcome! Please add yours!
For benchmarking cortexpy and cortexjdk
Official code repository for GATK versions 4 and up
DistributedMake - a perl library for pipelining with GNU make
DistributedMake for Python
Cortex on steroids: for larger populations with better assembly
Gil's HMM-based alignment/recombination software from Zilversmit et al. 2013.
A Python notebook playground
Uses CortexJDK to find novel exons in a transcriptome graph
Assessments of PacBio datasets
A coalescent textbook with much more detailed derivations than usually found in treatments of coalescent theory.
Playing with PyTorch
Simulate DNA sequencing reads using real reads
Repro: a tool for setting up a reproducible analysis directory
Generative adversarial networks (GAN) applied to sequential data via recurrent neural networks (RNN).
Solutions to McElreath's Statistical Rethinking textbook
Repository of writing (dissertation, articles, literature reviews, etc.)
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.