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aid-hs

Automated and Interpretable Detection of Hippocampal Sclerosis

bigbrain_plos_2020

Scripts used for BigBrain cortical layers paper

c_o

columns

cbig

column_orientation

brainhack column orientation

convolutional_meshes

framework to apply convolutional neural networks to neuroimaging surfaces

cortical_layers_tutorial

Workshop for using BigBrain atlas of cortical layers

epilepsy_ai_demo

Demo collab notebook for workshop

fcddetection

growth_curves

hello-world

jekyll-twitter-plugin

A Liquid tag plugin for the Jekyll blogging engine that embeds Tweets, Timelines and more from Twitter API

laminar_python

Tools for laminar analysis of the cortical sheet in Python

magicc

Multiscale Atlas of Gene expression for Integrative Cortical Cartography

matplotlib_surface_plotting

matplotlib mesh surface plotter

meld_fe_io

Data loaders and housekeeping tools for MELD focal epilepsy

meld_lg

Comparison of MELD lesion distributions with gene expression maps

melddemo

demo scripts for meld

meldproject.github.io

Website for Multi-centre Epilepsy Lesion Detection (MELD) Project

neurocombat

Harmonization of multi-site imaging data with ComBat (Python)

nilearn

Machine learning for NeuroImaging in Python

orientation_for_mila

pst-dev

Tools to translate between mesh surfaces and volumes

ptitprince

python version of raincloud

schizophrenia_gyral_sulcal

stripy

2D spherical and Cartesian triangulation toolkit using tripack, stripack, srfpack and ssrfpack

surf_coordinates

2D surface-based coordinate system based on geodesic distances

surface_tools

Tools for mesh surface-based operations

synth_shapes

synth shapes and interpretable models

tikz

Complete collection of my PGF/TikZ figures.