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KonradDanielewski avatar KonradDanielewski commented on May 25, 2024 1

Hello, this solved it. Calibration works now. Thank you

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lambdaloop avatar lambdaloop commented on May 25, 2024

Huh, that's odd. Could you share with me some example calibration videos so that I can try to reproduce this? You can email them to me if you'd prefer sharing them privately.

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KonradDanielewski avatar KonradDanielewski commented on May 25, 2024

Hello, I've put the whole calibration folder here, can also put the config file if it will be helpful. Do you think it might be because calibration info in config is wrong, or the sync is bad? https://drive.google.com/folderview?id=1kEVyL8a09cnoPEedE_op11mMeuBzp2D6

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lambdaloop avatar lambdaloop commented on May 25, 2024

Hi @KonradDanielewski,

I tried calibrating on my setup, and it seems to work. I suspect that there is an issue in the released version of anipose that I fixed since. I have updated anipose on pip (now to version 0.6.0).

Could you update and try again?

For reference, I needed to delete the "detections.pickle" and regenerate a new one for it to work properly. Here are the calibration.toml and detection.pickle files that I got. I also included the config.toml file that I used to generate these:
https://drive.google.com/open?id=14Y1mt_6PftRj9hkbU2PGfBp3bJ_G26wL

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KonradDanielewski avatar KonradDanielewski commented on May 25, 2024

I updated using pip, deleted the detections.pickle, but I get the same error. I will try to redo the whole env and try again this evening.

As for now, I updated the folder on google drive, it now contains the config I used, calibration videos and videos I wanted to label-3d.

If you have any general advise on what I can try and do, it'd be great.

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lambdaloop avatar lambdaloop commented on May 25, 2024

Hi @KonradDanielewski ,
I reproduced your error!
Turns out that I implicitly assume opencv-contrib of version 3, but I think you have version 4 installed.

Try running this to get the right version of opencv-contrib:
pip install opencv-contrib-python~=3.4

You may also need to downgrade opencv-python:
pip install opencv-python~=3.4

I've updated calligator to require the specific version of opencv

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