lianos Goto Github PK
Name: Steve Lianoglou
Type: User
Bio: Closing the gap between computational- and bench- scientists // #rstats oR bust!
Twitter: _lianos_
Location: San Francisco, CA
Name: Steve Lianoglou
Type: User
Bio: Closing the gap between computational- and bench- scientists // #rstats oR bust!
Twitter: _lianos_
Location: San Francisco, CA
A conglomeration of utilities that aren't project specific and use in my R day-to-day
Pedagogical machine learning exercises for NGS data
Smooth, find peaks and edges in 1D signal vectors.
An R interface to "shotgun", a parallel lasso and sparse logistic regression solver written in C++
A repository to store useful ~/.dotfiles
R Interface to the jQuery Plug-in DataTables
C Library to work with fasta/q files
Fishpond: differential transcript and gene expression with inferential replicates
Deprecated by GeneSetDb.MSigDB. This repository is only to be used with multiGSEA@prebioc.
Deprecated by GeneSetDb.MSigDB. This repository is only to be used with multiGSEA@prebioc.
Extensions to Bioconductor GenomicFeatures package. Primarily, this implements a more "Gene Centric" view on the world, as opposed to base GenomicFeature's transcript/exon/cds centric view.
Extensions to Gviz
Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae Kyung Im, Jonathan K. Pritchard
Personal web presence using blogdown + netlify
Utility that enables sending file attachments to MoinMoin wikis from the command line
Provides versioned MSigDB collections with ability to ortholog map to other species.
MSigDB gene sets for multiple organisms in a tidy data format
NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept here for posterity.
Provides shiny components to visualize multilGSEA results
A clean slate for my .emacs.d confs
Run commands against your Papers2 database from the command line
Eases some of the pain when using Sublime Text 2 to code in R
SeqGL is a group lasso based algorithm to extract TF sequence signals from ChIP, DNase and ATAC-seq profiles
Utilities to deal with sequencing data
A more R-idiomatic wrapper to the shogun toolbox.
Take command of your set enrichment analyses.
Provides shiny components to visualize sparrow GSEA results
Analysis of tag based high-throughput sequencing protocols
Configuration for https://lianos.r-universe.dev/
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.