Comments (1)
@joshstolz can you provide an update about why you closed this issue? In general doing so is useful for future self too. Thanks!
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Related Issues (20)
- Figure 3
- Figure 4
- Figure 5
- [BUG] Document when users need to specify set.seed() to ensure reproducibility of their results
- [BUG] Complete qSVA() wrapper HOT 2
- qsvaR workflow overview image
- Add a guide highlighting differences vs the qSVA 2017 method published in PNAS
- Provide access to all statistical model results
- Enhance flexibility of transcript selection
- Expand functionality for downstream analyses
- Guide for downstream analyses
- Helper functions for reproducing statistical modeling results that can be applied to subsets of the available data or new degradation datasets
- Guide for using helper functions to select transcripts associated with degradation in new subsets or new datasets
- Design a 2 day workshop / short course
- Translate course and intro documentation to Spanish
- Video guides for qsvaR
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- Guide for evaluating confounding of DE results with RNA degradation
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