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Liza Levitis's Projects

abannotate icon abannotate

A toolbox for ensemble-based multimodal gene-category enrichment analysis of human neuroimaging data

appian icon appian

APPIAN is an open-source automated software pipeline for analyzing PET images in conjunction with MRI. The goal of APPIAN is to make PET tracer kinetic data analysis easy for users with moderate computing skills and to facilitate reproducible research.

bitcoin icon bitcoin

Bitcoin Core integration/staging tree

brain-web.github.io icon brain-web.github.io

A permanent online space for the community to meet&matcha, work&watermelon, catch up&coffee.

brainconn icon brainconn

A Python implementation of the brain connectivity toolbox.

brainsforpublication icon brainsforpublication

Code and documentation for the Brains for Publication proposal for the 2016 OHBM Hackathon

brainspace icon brainspace

BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics datasets | available in both Python and Matlab |

clinica icon clinica

Software platform for clinical neuroimaging studies.

comp0088labs icon comp0088labs

Lab exercises for COMP0088 Introduction to Machine Learning

course icon course

Talks and materials for workshops based on the DataLad handbook

creativity_study icon creativity_study

This repository contains code used for a project studying personality and creativity measures associated with distinct navigation strategies.

curriculum icon curriculum

The curriculum of Techtonica, a free tech training and job placement program for women and non-binary adults with low incomes.

cv icon cv

my curriculum vitae

dcm2bids icon dcm2bids

Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure

deep-mri-qc icon deep-mri-qc

This project is trained on private MRI data, where scans are marked QC_PASS or QC_FAIL. Several architectures of neural networks are explored to make automatic predictions for new images.

deep-neurons icon deep-neurons

Deep Learning for automatic segmentation and classification of individual neurons in high-resolution histological scans.

dicat icon dicat

Tool to anonymize DICOM data headers.

dltk icon dltk

Deep Learning Toolkit for Medical Image Analysis

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