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aports

Mirror of aports repository

argparse2tool

transparently build CWL and Galaxy XML tool definitions for any script that uses argparse

arvados

An open source platform for managing and analyzing biomedical big data

ball

The Biochemical Algorithms Library

baseimage-docker-xenial

A minimal Ubuntu base image modified for Docker-friendliness. This ia a fork for Phusion, but for Ubuntu Xenial

better-files

Simple, safe and intuitive Scala I/O

biodb

This program is intended to provide access to several biological databases with a common interface and options to filter the content with a certain set of descriptors

broadcast-to-mqtt

Android app which sends broadcast intents to a MQTT broker.

bunny

Reproducible Analyses for Bioinformatics - Java

cinder-docker-driver

clinicalreporting_docxtemplater

Contains the code for generating clinical report with the docxtemplater

clinicalreportr

clinvap

Clinical Variant Annotation Pipeline

clms-ui

compose-spec

The Compose specification

contrib

The OpenMS contrib libraries

crosslink-viewer

web based visualisation of CLMS data

ctdopts

Gives your Python tools a CTD-compatible interface

cwljava

Java SDK for CWL

cwltool

Common Workflow Language reference implementation

datasciencecoursera

Data science signature track on Coursera

datasharing

The Leek group guide to data sharing

de.openms.dynamic

An example plugin for using the dynamic KNIME node generation capabilities of the GenericKNIMENodes base plugin.

dic-terminology-server

A wrapper for the BioPortal API that simplifies the access to BioPortal ontologies, classes, value sets and values

disopred

Protein structural disorder prediction

docker-client

A simple docker client for the JVM

docker-data

Data types for the Docker daemon (like container Ids)

docker-ls

Tools for browsing and manipulating docker registries.

docker_openms_archlinux_build

dockerfiles-openms

This repository holds Dockerfiles for creating docker images for several OpenMS configurations based on different base images.