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To draw general conclusions about the effects of different amino acid substitutions, we analyzed 34,373 mutations in fourteen proteins whose effects were measured using large-scale mutagenesis approaches. Methionine was the most tolerated substitution while proline was the least tolerated. Histidine and asparagine best recapitulated the effects of
💊 A 3D Generative Model for Structure-Based Drug Design (NeurIPS 2021)
AEDNet: Adaptive Edge-Deleting Network For Subgraph Matching
Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.
This is the code of paper "De Novo Molecular Generation via Connection-aware Motif Mining". Zijie Geng, Shufang Xie, Yingce Xia, Lijun Wu, Tao Qin, Jie Wang, Yongdong Zhang, Feng Wu, Tie-Yan Liu. ICLR 2023.
A tool for retrosynthetic planning
An open tool implementing some recommended practices for analyzing alchemical free energy calculations
the simple alchemistry library
AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By adding the molecular context to the protein structures, the models can be more easily appreciated in terms of function and structure integrity.
Open source code for AlphaFold.
To eventually become an unofficial Pytorch implementation / replication of Alphafold2, as details of the architecture get released
An annotated implementation of the Transformer paper.
Software package for computer aided synthesis planning
A Deep-Learning-Based Chinese Speech Recognition System 基于深度学习的中文语音识别系统
An experimental open-source attempt to make GPT-4 fully autonomous.
A 13B large language model developed by Baichuan Intelligent Technology
this is the BateStab program
Code for "Biological Sequence Design with GFlowNets", 2022
Base image providing dependencies for ASKCOS Docker images
Implementation of Chroma, generative models of protein using DDPM and GNNs, in Pytorch
arbitrary precision clebsch-gordan coefficients for SO(3)
Repository of Jupyter Notebooks on Colab, Binder and Huggingface for Bio, Chemistry and Physics
Making Protein Design accessible to all via Google Colab!
Making Protein folding accessible to all!
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.