Comments (3)
Hi,
This one was a little tricky, but is a result of there being only 1 gene KLF7
reconstructed by each assembler. Was this fastQ dataset intentionally reduced to serve as a test dataset?
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Yes, it is a reduced dataset for test purposes. Still, it should be able to handle that right?
from oyster_river_protocol.
One can make a reduced dataset that is not representative of any real dataset, and then it's reasonably for the software to fail. I think this is what is happening here. No real transcriptome dataset would contain reads from only 1 transcript.
That being said, I will work on an enhancement that will provide a more informative error message that would cover this specific issue
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