Name: Maël Lefeuvre
Type: User
Company: UMR7206 - Éco-anthropologie
Bio: PhD student in bioinformatics and paleogenetics @ Musée de l'Homme - Muséum National d'Histoire Naturelle
Location: 17 Place du Trocadéro - 75016 Paris
Maël Lefeuvre's Projects
Conda recipes for the bioconda channel.
A private git/github crash course
An ancient DNA genetic relatedness estimation software relying on pedigree simulations
A set of snakemake workflows and jupyter notebooks to benchmark the runtime, memory consumption, and performance of GRUPS-rs.
grups.plots is a companion R package to grups-rs, providing with a Shiny dashboard, harboring multiple interactive visualizations, utilities and summary statistics to analyse its results
High level Rust bindings for libsvm
Script and utilities applied to perform kinship analysis between ancient Mentesh-Tepe individuals, found in (Garino-Vignon, P., et al 2023)
This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.
A Quick'n'dirty minimal reproducible example for https://github.com/rust-bio/rust-htslib/issues/401
[Fork] Forked project of TKGWV2 https://github.com/danimfernandes/tkgwv2. This fork merely *adds* upon the initial API, by providing users with an additional CLI for the helper scripts: TK-helpers.py (see the develop branch). The core algorithm of TKGWV2 remains untampered.
A quick'n'dirty Minimal Reproducible Example illustrating https://github.com/danimfernandes/tkgwv2/issues/6