Comments (1)
Francesco1993
commented on June 1, 2024
Hello,
I'm trying to use your package but I don't know why it behaves in this way and I'm not able to perform ORA. Am I doing something wrong? Thank you.
Francesco
P.S. this is the code that I'm using:
gs.annot <- buildIdx(entrezIDs = orthologs_biomarkers_monkey_delta_entrez_human$entrezgene_human, species = "human",
gsdb.gsets = "all")
from egsea.
Related Issues (17)
- egsea.ora fails when 'title' has spaces
- Error in Show Pathway
- Error when sort.by not pvals
- Dealing with 'NA' or absent entrezids for rownames in voom object
- Integrating EGSEA plotSummary in Rmarkdown
- One of the base methods failed on this dataset HOT 1
- Typo in man page for showSetByName
- EGSEA::egsea - Parallelization issue and "Error in array(col.rgb[, i], dim(node.rgb)[3:1]) : negative length vectors are not allowed" HOT 1
- Rename entrezIDs into geneIDs in egsea.ora
- Is it possible to use pre-ranked gene lists in EGSEA? HOT 1
- Implement additional visualizations using joyplots
- defensive programming for buildIdx to avoid bad gene sets
- Conversion between the different ID annotations
- Feature Request: More flexible data input
- Feature Request: Improvements to graphic handling
- Feature Request: topSets enhancements
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from egsea.