Comments (9)
wolfv
commented on May 18, 2024
It's your fault! ;)
This is the offending line:
https://github.com/conda-forge/pandas-feedstock/blob/35b6319c4180f1e89533fe543e540ed16c4c569c/recipe/meta.yaml#L29
I'm currently parsing this as >=2.5,<2.6 but apparently conda does do >=2.5
Mixing stars and relational operators should be forbidden. I'll try to push conda-forge's linter to disallow this.
from mamba.
wolfv
commented on May 18, 2024
We can change the behavior for the next release of mamba so that this behavior is backward-compatible!
Thanks for trying it out, by the way!
from mamba.
wolfv
commented on May 18, 2024
I fixed the first issue, but the parser needs to become a little smarter (supporting != and | statements as well)
from mamba.
wolfv
commented on May 18, 2024
Works with 0.0.3 (as far as I can tell!)
Let us know if you see other problems! :)
from mamba.
jorisvandenbossche
commented on May 18, 2024
Tested again with 0.3, and indeed now working nicely (for this specific case)
It does however give a slightly different result compared to conda (but not sure if this is important / a problem, just noted it). The main difference seems to be that mamba is getting qt from the defaults channel, while conda gets it from conda-forge (in addition also pcre, gstreamer, gst-plugins-base, expat and dbus come from defaults instead of conda-forge).
$ mamba create -n mamba-geo-test python geopandas cartopy ipython
$ mamba create -n mamba-geo-test python geopandas cartopy ipython
__ __ __ __
/ \ / \ / \ / \
/ \/ \/ \/ \
███████████████/ /██/ /██/ /██/ /████████████████████████
/ / \ / \ / \ / \ \____
/ / \_/ \_/ \_/ \ o \__,
/ _/ \_____/ `
|/
███╗ ███╗ █████╗ ███╗ ███╗██████╗ █████╗
████╗ ████║██╔══██╗████╗ ████║██╔══██╗██╔══██╗
██╔████╔██║███████║██╔████╔██║██████╔╝███████║
██║╚██╔╝██║██╔══██║██║╚██╔╝██║██╔══██╗██╔══██║
██║ ╚═╝ ██║██║ ██║██║ ╚═╝ ██║██████╔╝██║ ██║
╚═╝ ╚═╝╚═╝ ╚═╝╚═╝ ╚═╝╚═════╝ ╚═╝ ╚═╝
Supported by @QuantStack
Github: https://github.com/QuantStack/mamba
Twitter: https://twitter.com/QuantStack
█████████████████████████████████████████████████████████████
Getting https://conda.anaconda.org/conda-forge/linux-64
Getting https://conda.anaconda.org/conda-forge/noarch
Getting https://repo.anaconda.com/pkgs/main/linux-64
Getting https://repo.anaconda.com/pkgs/main/noarch
Getting https://repo.anaconda.com/pkgs/free/linux-64
Getting https://repo.anaconda.com/pkgs/free/noarch
Getting https://repo.anaconda.com/pkgs/r/linux-64
Getting https://repo.anaconda.com/pkgs/r/noarch
Looking for: ['python', 'geopandas', 'cartopy', 'ipython']
Parsing /home/joris/miniconda3/pkgs/cache/497deca9.json
60854 packages in https://conda.anaconda.org/conda-forge/linux-64
Parsing /home/joris/miniconda3/pkgs/cache/09cdf8bf.json
8976 packages in https://conda.anaconda.org/conda-forge/noarch
Parsing /home/joris/miniconda3/pkgs/cache/47929eba.json
12722 packages in https://repo.anaconda.com/pkgs/main/linux-64
Parsing /home/joris/miniconda3/pkgs/cache/3e39a7aa.json
468 packages in https://repo.anaconda.com/pkgs/main/noarch
Parsing /home/joris/miniconda3/pkgs/cache/98cb6fa3.json
13329 packages in https://repo.anaconda.com/pkgs/free/linux-64
Parsing /home/joris/miniconda3/pkgs/cache/d77296e0.json
29 packages in https://repo.anaconda.com/pkgs/free/noarch
Parsing /home/joris/miniconda3/pkgs/cache/2ce54b42.json
5072 packages in https://repo.anaconda.com/pkgs/r/linux-64
Parsing /home/joris/miniconda3/pkgs/cache/4ea078d6.json
1 packages in https://repo.anaconda.com/pkgs/r/noarch
Allowing downgrade: 1
Creating the solver...
Job: python
Job: geopandas
Job: cartopy
Job: ipython
Encountered 0 problems.
140 installed packages:
- asn1crypto-0.24.0.1003-py37_1003.<NULL>
- attrs-19.1.0.0-py_0.<NULL>
- backcall-0.1.0.0-py_0.<NULL>
- boost-cpp-1.68.0.1000-h11c811c_1000.<NULL>
- bzip2-1.0.6.1002-h14c3975_1002.<NULL>
- ca-certificates-2019.3.9.0-hecc5488_0.<NULL>
- cairo-1.14.12.1005-h80bd089_1005.<NULL>
- cartopy-0.17.0.1004-py37h0aa2c8f_1004.<NULL>
- certifi-2019.3.9.0-py37_0.<NULL>
- cffi-1.12.2.1-py37hf0e25f4_1.<NULL>
- chardet-3.0.4.1003-py37_1003.<NULL>
- click-7.0.0.0-py_0.<NULL>
- click-plugins-1.0.4.0-py_0.<NULL>
- cligj-0.5.0.0-py_0.<NULL>
- cryptography-2.6.1.0-py37h72c5cf5_0.<NULL>
- curl-7.64.0.2-h646f8bb_2.<NULL>
- cycler-0.10.0.1-py_1.<NULL>
- dbus-1.13.6.0-h746ee38_0.<NULL>
- decorator-4.4.0.0-py_0.<NULL>
- descartes-1.1.0.2-py_2.<NULL>
- expat-2.2.6.0-he6710b0_0.<NULL>
- fiona-1.8.6.2-py37hf242f0b_2.<NULL>
- fontconfig-2.13.1.1000-he4413a7_1000.<NULL>
- freetype-2.10.0.0-he983fc9_0.<NULL>
- freexl-1.0.5.1002-h14c3975_1002.<NULL>
- gdal-2.4.1.0-py37hf242f0b_0.<NULL>
- geopandas-0.4.1.1-py_1.<NULL>
- geos-3.7.1.1000-hf484d3e_1000.<NULL>
- geotiff-1.4.3.1000-h1105359_1000.<NULL>
- gettext-0.19.8.1.1002-hc5be6a0_1002.<NULL>
- giflib-5.1.7.1-h516909a_1.<NULL>
- glib-2.56.2.1001-had28632_1001.<NULL>
- gst-plugins-base-1.14.0.1-hbbd80ab_1.<NULL>
- gstreamer-1.14.0.1-hb453b48_1.<NULL>
- hdf4-4.2.13.1002-h9a582f1_1002.<NULL>
- hdf5-1.10.4.1106-nompi_h3c11f04_1106.<NULL>
- icu-58.2.0.1000-hf484d3e_1000.<NULL>
- idna-2.8.0.1000-py37_1000.<NULL>
- ipython-7.4.0.0-py37h24bf2e0_0.<NULL>
- ipython_genutils-0.2.0.1-py_1.<NULL>
- jedi-0.13.3.0-py37_0.<NULL>
- jpeg-9c.0.0.1001-h14c3975_1001.<NULL>
- json-c-0.13.1.1001-h14c3975_1001.<NULL>
- kealib-1.4.10.1003-h1978553_1003.<NULL>
- kiwisolver-1.0.1.1002-py37h6bb024c_1002.<NULL>
- krb5-1.16.3.1001-h05b26f9_1001.<NULL>
- libblas-3.8.0.4-4_openblas.<NULL>
- libcblas-3.8.0.4-4_openblas.<NULL>
- libcurl-7.64.0.2-h541490c_2.<NULL>
- libdap4-3.19.1.1000-hd48c02d_1000.<NULL>
- libedit-3.1.20170329.1001-hf8c457e_1001.<NULL>
- libffi-3.2.1.1006-he1b5a44_1006.<NULL>
- libgcc-ng-8.2.0.1-hdf63c60_1.<NULL>
- libgdal-2.4.1.0-hdb8f723_0.<NULL>
- libgfortran-ng-7.3.0.0-hdf63c60_0.<NULL>
- libiconv-1.15.0.1005-h516909a_1005.<NULL>
- libkml-1.3.0.1009-h328b03d_1009.<NULL>
- liblapack-3.8.0.4-4_openblas.<NULL>
- libnetcdf-4.6.2.1001-hbdf4f91_1001.<NULL>
- libpng-1.6.36.1000-h84994c4_1000.<NULL>
- libpq-11.2.0.0-h4770945_0.<NULL>
- libspatialindex-1.9.0.0-he1b5a44_0.<NULL>
- libspatialite-4.3.0a.1026-hb5ec416_1026.<NULL>
- libssh2-1.8.2.0-h22169c7_0.<NULL>
- libstdcxx-ng-8.2.0.1-hdf63c60_1.<NULL>
- libtiff-4.0.10.1002-h9022e91_1002.<NULL>
- libuuid-2.32.1.1000-h14c3975_1000.<NULL>
- libxcb-1.13.0.1002-h14c3975_1002.<NULL>
- libxml2-2.9.8.1005-h143f9aa_1005.<NULL>
- libxslt-1.1.32.1002-h4785a14_1002.<NULL>
- lxml-4.3.2.0-py37h23eabaa_0.<NULL>
- mapclassify-2.0.1.0-py_0.<NULL>
- matplotlib-3.0.3.0-py37_0.<NULL>
- matplotlib-base-3.0.3.0-py37h167e16e_0.<NULL>
- munch-2.3.2.0-py_0.<NULL>
- ncurses-6.1.0.1002-hf484d3e_1002.<NULL>
- numpy-1.16.2.1-py37h8b7e671_1.<NULL>
- olefile-0.46.0.0-py_0.<NULL>
- openblas-0.3.5.1001-h9ac9557_1001.<NULL>
- openjpeg-2.3.0.1003-hf38bd82_1003.<NULL>
- openssl-1.1.1b.1-h14c3975_1.<NULL>
- owslib-0.17.1.0-py_0.<NULL>
- pandas-0.24.2.0-py37hf484d3e_0.<NULL>
- parso-0.3.4.0-py_0.<NULL>
- pcre-8.43.0.0-he6710b0_0.<NULL>
- pexpect-4.6.0.1000-py37_1000.<NULL>
- pickleshare-0.7.5.1000-py37_1000.<NULL>
- pillow-5.4.1.1000-py37h00a061d_1000.<NULL>
- pixman-0.34.0.1003-h14c3975_1003.<NULL>
- poppler-0.67.0.1002-h2fc8fa2_1002.<NULL>
- poppler-data-0.4.9.0-0.<NULL>
- postgresql-11.2.0.0-h61314c7_0.<NULL>
- proj4-5.2.0.1001-h14c3975_1001.<NULL>
- prompt_toolkit-2.0.9.0-py_0.<NULL>
- pthread-stubs-0.4.0.1001-h14c3975_1001.<NULL>
- ptyprocess-0.6.0.1000-py37_1000.<NULL>
- pycparser-2.19.0.1-py37_1.<NULL>
- pyepsg-0.4.0.0-py_0.<NULL>
- pygments-2.3.1.0-py_0.<NULL>
- pykdtree-1.3.1.1002-py37h3010b51_1002.<NULL>
- pyopenssl-19.0.0.0-py37_0.<NULL>
- pyparsing-2.3.1.0-py_0.<NULL>
- pyproj-1.9.6.1000-py37hc0953d3_1000.<NULL>
- pyqt-5.6.0.1008-py37h13b7fb3_1008.<NULL>
- pyshp-2.1.0.0-py_0.<NULL>
- pysocks-1.6.8.1002-py37_1002.<NULL>
- python-3.7.2.0-h381d211_0.<NULL>
- python-dateutil-2.8.0.0-py_0.<NULL>
- pytz-2018.9.0.0-py_0.<NULL>
- qt-5.6.3.3-h8bf5577_3.<NULL>
- readline-7.0.0.1001-hf8c457e_1001.<NULL>
- requests-2.21.0.1000-py37_1000.<NULL>
- rtree-0.8.3.1002-py37h666c49c_1002.<NULL>
- scipy-1.2.1.1-py37h09a28d5_1.<NULL>
- setuptools-40.8.0.0-py37_0.<NULL>
- shapely-1.6.4.1003-py37h2afed24_1003.<NULL>
- sip-4.18.1.1000-py37hf484d3e_1000.<NULL>
- six-1.12.0.1000-py37_1000.<NULL>
- sqlite-3.26.0.1001-h67949de_1001.<NULL>
- tk-8.6.9.1000-h84994c4_1000.<NULL>
- tornado-6.0.2.0-py37h516909a_0.<NULL>
- traitlets-4.3.2.1000-py37_1000.<NULL>
- tzcode-2018g.0.0.1001-h14c3975_1001.<NULL>
- urllib3-1.24.1.1000-py37_1000.<NULL>
- wcwidth-0.1.7.1-py_1.<NULL>
- xerces-c-3.2.2.1001-hac72e42_1001.<NULL>
- xorg-kbproto-1.0.7.1002-h14c3975_1002.<NULL>
- xorg-libice-1.0.9.1004-h516909a_1004.<NULL>
- xorg-libsm-1.2.3.1000-h84519dc_1000.<NULL>
- xorg-libx11-1.6.7.1000-h14c3975_1000.<NULL>
- xorg-libxau-1.0.9.0-h14c3975_0.<NULL>
- xorg-libxdmcp-1.1.3.0-h516909a_0.<NULL>
- xorg-libxext-1.3.4.0-h516909a_0.<NULL>
- xorg-libxrender-0.9.10.1002-h516909a_1002.<NULL>
- xorg-renderproto-0.11.1.1002-h14c3975_1002.<NULL>
- xorg-xextproto-7.3.0.1002-h14c3975_1002.<NULL>
- xorg-xproto-7.0.31.1007-h14c3975_1007.<NULL>
- xz-5.2.4.1001-h14c3975_1001.<NULL>
- zlib-1.2.11.1004-h14c3975_1004.<NULL>
- zstd-1.3.3.1-1.<NULL>
Solution:
## Package Plan ##
environment location: /home/joris/miniconda3/envs/mamba-geo-test
added / updated specs:
- cartopy
- geopandas
- ipython
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
cairo-1.14.12 | h80bd089_1005 1.4 MB conda-forge
cryptography-2.6.1 | py37h72c5cf5_0 607 KB conda-forge
curl-7.64.0 | h646f8bb_2 143 KB conda-forge
dbus-1.13.6 | h746ee38_0 587 KB
expat-2.2.6 | he6710b0_0 187 KB
fiona-1.8.6 | py37hf242f0b_2 1.1 MB conda-forge
gdal-2.4.1 | py37hf242f0b_0 1.4 MB conda-forge
glib-2.56.2 | had28632_1001 4.7 MB conda-forge
gst-plugins-base-1.14.0 | hbbd80ab_1 6.3 MB
gstreamer-1.14.0 | hb453b48_1 3.8 MB
hdf5-1.10.4 |nompi_h3c11f04_1106 5.3 MB conda-forge
kealib-1.4.10 | h1978553_1003 172 KB conda-forge
krb5-1.16.3 | h05b26f9_1001 1.4 MB conda-forge
libcurl-7.64.0 | h541490c_2 573 KB conda-forge
libgdal-2.4.1 | hdb8f723_0 18.3 MB conda-forge
libpq-11.2 | h4770945_0 2.4 MB conda-forge
libssh2-1.8.2 | h22169c7_0 242 KB conda-forge
pcre-8.43 | he6710b0_0 260 KB
poppler-0.67.0 | h2fc8fa2_1002 8.8 MB conda-forge
poppler-data-0.4.9 | 0 3.5 MB conda-forge
postgresql-11.2 | h61314c7_0 4.9 MB conda-forge
qt-5.6.3 | h8bf5577_3 45.7 MB
tornado-6.0.2 | py37h516909a_0 635 KB conda-forge
------------------------------------------------------------
Total: 112.4 MB
The following NEW packages will be INSTALLED:
asn1crypto conda-forge/linux-64::asn1crypto-0.24.0-py37_1003
attrs conda-forge/noarch::attrs-19.1.0-py_0
backcall conda-forge/noarch::backcall-0.1.0-py_0
boost-cpp conda-forge/linux-64::boost-cpp-1.68.0-h11c811c_1000
bzip2 conda-forge/linux-64::bzip2-1.0.6-h14c3975_1002
ca-certificates conda-forge/linux-64::ca-certificates-2019.3.9-hecc5488_0
cairo conda-forge/linux-64::cairo-1.14.12-h80bd089_1005
cartopy conda-forge/linux-64::cartopy-0.17.0-py37h0aa2c8f_1004
certifi conda-forge/linux-64::certifi-2019.3.9-py37_0
cffi conda-forge/linux-64::cffi-1.12.2-py37hf0e25f4_1
chardet conda-forge/linux-64::chardet-3.0.4-py37_1003
click conda-forge/noarch::click-7.0-py_0
click-plugins conda-forge/noarch::click-plugins-1.0.4-py_0
cligj conda-forge/noarch::cligj-0.5.0-py_0
cryptography conda-forge/linux-64::cryptography-2.6.1-py37h72c5cf5_0
curl conda-forge/linux-64::curl-7.64.0-h646f8bb_2
cycler conda-forge/noarch::cycler-0.10.0-py_1
dbus pkgs/main/linux-64::dbus-1.13.6-h746ee38_0
decorator conda-forge/noarch::decorator-4.4.0-py_0
descartes conda-forge/noarch::descartes-1.1.0-py_2
expat pkgs/main/linux-64::expat-2.2.6-he6710b0_0
fiona conda-forge/linux-64::fiona-1.8.6-py37hf242f0b_2
fontconfig conda-forge/linux-64::fontconfig-2.13.1-he4413a7_1000
freetype conda-forge/linux-64::freetype-2.10.0-he983fc9_0
freexl conda-forge/linux-64::freexl-1.0.5-h14c3975_1002
gdal conda-forge/linux-64::gdal-2.4.1-py37hf242f0b_0
geopandas conda-forge/noarch::geopandas-0.4.1-py_1
geos conda-forge/linux-64::geos-3.7.1-hf484d3e_1000
geotiff conda-forge/linux-64::geotiff-1.4.3-h1105359_1000
gettext conda-forge/linux-64::gettext-0.19.8.1-hc5be6a0_1002
giflib conda-forge/linux-64::giflib-5.1.7-h516909a_1
glib conda-forge/linux-64::glib-2.56.2-had28632_1001
gst-plugins-base pkgs/main/linux-64::gst-plugins-base-1.14.0-hbbd80ab_1
gstreamer pkgs/main/linux-64::gstreamer-1.14.0-hb453b48_1
hdf4 conda-forge/linux-64::hdf4-4.2.13-h9a582f1_1002
hdf5 conda-forge/linux-64::hdf5-1.10.4-nompi_h3c11f04_1106
icu conda-forge/linux-64::icu-58.2-hf484d3e_1000
idna conda-forge/linux-64::idna-2.8-py37_1000
ipython conda-forge/linux-64::ipython-7.4.0-py37h24bf2e0_0
ipython_genutils conda-forge/noarch::ipython_genutils-0.2.0-py_1
jedi conda-forge/linux-64::jedi-0.13.3-py37_0
jpeg conda-forge/linux-64::jpeg-9c-h14c3975_1001
json-c conda-forge/linux-64::json-c-0.13.1-h14c3975_1001
kealib conda-forge/linux-64::kealib-1.4.10-h1978553_1003
kiwisolver conda-forge/linux-64::kiwisolver-1.0.1-py37h6bb024c_1002
krb5 conda-forge/linux-64::krb5-1.16.3-h05b26f9_1001
libblas conda-forge/linux-64::libblas-3.8.0-4_openblas
libcblas conda-forge/linux-64::libcblas-3.8.0-4_openblas
libcurl conda-forge/linux-64::libcurl-7.64.0-h541490c_2
libdap4 conda-forge/linux-64::libdap4-3.19.1-hd48c02d_1000
libedit conda-forge/linux-64::libedit-3.1.20170329-hf8c457e_1001
libffi conda-forge/linux-64::libffi-3.2.1-he1b5a44_1006
libgcc-ng pkgs/main/linux-64::libgcc-ng-8.2.0-hdf63c60_1
libgdal conda-forge/linux-64::libgdal-2.4.1-hdb8f723_0
libgfortran-ng pkgs/main/linux-64::libgfortran-ng-7.3.0-hdf63c60_0
libiconv conda-forge/linux-64::libiconv-1.15-h516909a_1005
libkml conda-forge/linux-64::libkml-1.3.0-h328b03d_1009
liblapack conda-forge/linux-64::liblapack-3.8.0-4_openblas
libnetcdf conda-forge/linux-64::libnetcdf-4.6.2-hbdf4f91_1001
libpng conda-forge/linux-64::libpng-1.6.36-h84994c4_1000
libpq conda-forge/linux-64::libpq-11.2-h4770945_0
libspatialindex conda-forge/linux-64::libspatialindex-1.9.0-he1b5a44_0
libspatialite conda-forge/linux-64::libspatialite-4.3.0a-hb5ec416_1026
libssh2 conda-forge/linux-64::libssh2-1.8.2-h22169c7_0
libstdcxx-ng pkgs/main/linux-64::libstdcxx-ng-8.2.0-hdf63c60_1
libtiff conda-forge/linux-64::libtiff-4.0.10-h9022e91_1002
libuuid conda-forge/linux-64::libuuid-2.32.1-h14c3975_1000
libxcb conda-forge/linux-64::libxcb-1.13-h14c3975_1002
libxml2 conda-forge/linux-64::libxml2-2.9.8-h143f9aa_1005
libxslt conda-forge/linux-64::libxslt-1.1.32-h4785a14_1002
lxml conda-forge/linux-64::lxml-4.3.2-py37h23eabaa_0
mapclassify conda-forge/noarch::mapclassify-2.0.1-py_0
matplotlib conda-forge/linux-64::matplotlib-3.0.3-py37_0
matplotlib-base conda-forge/linux-64::matplotlib-base-3.0.3-py37h167e16e_0
munch conda-forge/noarch::munch-2.3.2-py_0
ncurses conda-forge/linux-64::ncurses-6.1-hf484d3e_1002
numpy conda-forge/linux-64::numpy-1.16.2-py37h8b7e671_1
olefile conda-forge/noarch::olefile-0.46-py_0
openblas conda-forge/linux-64::openblas-0.3.5-h9ac9557_1001
openjpeg conda-forge/linux-64::openjpeg-2.3.0-hf38bd82_1003
openssl conda-forge/linux-64::openssl-1.1.1b-h14c3975_1
owslib conda-forge/noarch::owslib-0.17.1-py_0
pandas conda-forge/linux-64::pandas-0.24.2-py37hf484d3e_0
parso conda-forge/noarch::parso-0.3.4-py_0
pcre pkgs/main/linux-64::pcre-8.43-he6710b0_0
pexpect conda-forge/linux-64::pexpect-4.6.0-py37_1000
pickleshare conda-forge/linux-64::pickleshare-0.7.5-py37_1000
pillow conda-forge/linux-64::pillow-5.4.1-py37h00a061d_1000
pixman conda-forge/linux-64::pixman-0.34.0-h14c3975_1003
poppler conda-forge/linux-64::poppler-0.67.0-h2fc8fa2_1002
poppler-data conda-forge/linux-64::poppler-data-0.4.9-0
postgresql conda-forge/linux-64::postgresql-11.2-h61314c7_0
proj4 conda-forge/linux-64::proj4-5.2.0-h14c3975_1001
prompt_toolkit conda-forge/noarch::prompt_toolkit-2.0.9-py_0
pthread-stubs conda-forge/linux-64::pthread-stubs-0.4-h14c3975_1001
ptyprocess conda-forge/linux-64::ptyprocess-0.6.0-py37_1000
pycparser conda-forge/linux-64::pycparser-2.19-py37_1
pyepsg conda-forge/noarch::pyepsg-0.4.0-py_0
pygments conda-forge/noarch::pygments-2.3.1-py_0
pykdtree conda-forge/linux-64::pykdtree-1.3.1-py37h3010b51_1002
pyopenssl conda-forge/linux-64::pyopenssl-19.0.0-py37_0
pyparsing conda-forge/noarch::pyparsing-2.3.1-py_0
pyproj conda-forge/linux-64::pyproj-1.9.6-py37hc0953d3_1000
pyqt conda-forge/linux-64::pyqt-5.6.0-py37h13b7fb3_1008
pyshp conda-forge/noarch::pyshp-2.1.0-py_0
pysocks conda-forge/linux-64::pysocks-1.6.8-py37_1002
python conda-forge/linux-64::python-3.7.2-h381d211_0
python-dateutil conda-forge/noarch::python-dateutil-2.8.0-py_0
pytz conda-forge/noarch::pytz-2018.9-py_0
qt pkgs/main/linux-64::qt-5.6.3-h8bf5577_3
readline conda-forge/linux-64::readline-7.0-hf8c457e_1001
requests conda-forge/linux-64::requests-2.21.0-py37_1000
rtree conda-forge/linux-64::rtree-0.8.3-py37h666c49c_1002
scipy conda-forge/linux-64::scipy-1.2.1-py37h09a28d5_1
setuptools conda-forge/linux-64::setuptools-40.8.0-py37_0
shapely conda-forge/linux-64::shapely-1.6.4-py37h2afed24_1003
sip conda-forge/linux-64::sip-4.18.1-py37hf484d3e_1000
six conda-forge/linux-64::six-1.12.0-py37_1000
sqlite conda-forge/linux-64::sqlite-3.26.0-h67949de_1001
tk conda-forge/linux-64::tk-8.6.9-h84994c4_1000
tornado conda-forge/linux-64::tornado-6.0.2-py37h516909a_0
traitlets conda-forge/linux-64::traitlets-4.3.2-py37_1000
tzcode conda-forge/linux-64::tzcode-2018g-h14c3975_1001
urllib3 conda-forge/linux-64::urllib3-1.24.1-py37_1000
wcwidth conda-forge/noarch::wcwidth-0.1.7-py_1
xerces-c conda-forge/linux-64::xerces-c-3.2.2-hac72e42_1001
xorg-kbproto conda-forge/linux-64::xorg-kbproto-1.0.7-h14c3975_1002
xorg-libice conda-forge/linux-64::xorg-libice-1.0.9-h516909a_1004
xorg-libsm conda-forge/linux-64::xorg-libsm-1.2.3-h84519dc_1000
xorg-libx11 conda-forge/linux-64::xorg-libx11-1.6.7-h14c3975_1000
xorg-libxau conda-forge/linux-64::xorg-libxau-1.0.9-h14c3975_0
xorg-libxdmcp conda-forge/linux-64::xorg-libxdmcp-1.1.3-h516909a_0
xorg-libxext conda-forge/linux-64::xorg-libxext-1.3.4-h516909a_0
xorg-libxrender conda-forge/linux-64::xorg-libxrender-0.9.10-h516909a_1002
xorg-renderproto conda-forge/linux-64::xorg-renderproto-0.11.1-h14c3975_1002
xorg-xextproto conda-forge/linux-64::xorg-xextproto-7.3.0-h14c3975_1002
xorg-xproto conda-forge/linux-64::xorg-xproto-7.0.31-h14c3975_1007
xz conda-forge/linux-64::xz-5.2.4-h14c3975_1001
zlib conda-forge/linux-64::zlib-1.2.11-h14c3975_1004
zstd conda-forge/linux-64::zstd-1.3.3-1
Proceed ([y]/n)? n
Exiting.
$ conda create -n mamba-geo-test python geopandas cartopy ipython
$ conda create -n mamba-geo-test python geopandas cartopy ipython
Collecting package metadata: done
Solving environment: done
## Package Plan ##
environment location: /home/joris/miniconda3/envs/mamba-geo-test
added / updated specs:
- cartopy
- geopandas
- ipython
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
hdf5-1.10.4 |nompi_h3c11f04_1106 5.3 MB conda-forge
kealib-1.4.10 | h1978553_1003 172 KB conda-forge
tornado-6.0.2 | py37h516909a_0 635 KB conda-forge
------------------------------------------------------------
Total: 6.1 MB
The following NEW packages will be INSTALLED:
asn1crypto conda-forge/linux-64::asn1crypto-0.24.0-py37_1003
atk conda-forge/linux-64::atk-2.25.90-hb9dd440_1002
attrs conda-forge/noarch::attrs-19.1.0-py_0
backcall conda-forge/noarch::backcall-0.1.0-py_0
boost-cpp conda-forge/linux-64::boost-cpp-1.68.0-h11c811c_1000
bzip2 conda-forge/linux-64::bzip2-1.0.6-h14c3975_1002
ca-certificates conda-forge/linux-64::ca-certificates-2019.3.9-hecc5488_0
cairo conda-forge/linux-64::cairo-1.16.0-ha4e643d_1000
cartopy conda-forge/linux-64::cartopy-0.17.0-py37h0aa2c8f_1004
certifi conda-forge/linux-64::certifi-2019.3.9-py37_0
cffi conda-forge/linux-64::cffi-1.12.2-py37hf0e25f4_1
chardet conda-forge/linux-64::chardet-3.0.4-py37_1003
click conda-forge/noarch::click-7.0-py_0
click-plugins conda-forge/noarch::click-plugins-1.0.4-py_0
cligj conda-forge/noarch::cligj-0.5.0-py_0
cryptography conda-forge/linux-64::cryptography-2.5-py37hb7f436b_1
curl conda-forge/linux-64::curl-7.64.0-h646f8bb_0
cycler conda-forge/noarch::cycler-0.10.0-py_1
dbus conda-forge/linux-64::dbus-1.13.0-h4e0c4b3_1000
decorator conda-forge/noarch::decorator-4.4.0-py_0
descartes conda-forge/noarch::descartes-1.1.0-py_2
expat conda-forge/linux-64::expat-2.2.5-hf484d3e_1002
fiona conda-forge/linux-64::fiona-1.8.6-py37hf242f0b_0
fontconfig conda-forge/linux-64::fontconfig-2.13.1-he4413a7_1000
freetype conda-forge/linux-64::freetype-2.10.0-he983fc9_0
freexl conda-forge/linux-64::freexl-1.0.5-h14c3975_1002
gdal conda-forge/linux-64::gdal-2.4.0-py37h1c6dbfb_1002
gdk-pixbuf conda-forge/linux-64::gdk-pixbuf-2.36.12-h49783d7_1002
geopandas conda-forge/noarch::geopandas-0.4.1-py_1
geos conda-forge/linux-64::geos-3.7.1-hf484d3e_1000
geotiff conda-forge/linux-64::geotiff-1.4.3-h1105359_1000
gettext conda-forge/linux-64::gettext-0.19.8.1-hc5be6a0_1002
giflib conda-forge/linux-64::giflib-5.1.7-h516909a_1
glib conda-forge/linux-64::glib-2.58.3-hf63aee3_1001
gobject-introspec~ conda-forge/linux-64::gobject-introspection-1.58.2-py37h2da5eee_1000
graphite2 conda-forge/linux-64::graphite2-1.3.13-hf484d3e_1000
gstreamer conda-forge/linux-64::gstreamer-1.14.4-h66beb1c_1001
gtk2 conda-forge/linux-64::gtk2-2.24.31-hb68c50a_1001
harfbuzz conda-forge/linux-64::harfbuzz-2.3.1-h6824563_0
hdf4 conda-forge/linux-64::hdf4-4.2.13-h9a582f1_1002
hdf5 conda-forge/linux-64::hdf5-1.10.4-nompi_h3c11f04_1106
icu conda-forge/linux-64::icu-58.2-hf484d3e_1000
idna conda-forge/linux-64::idna-2.8-py37_1000
ipython conda-forge/linux-64::ipython-7.4.0-py37h24bf2e0_0
ipython_genutils conda-forge/noarch::ipython_genutils-0.2.0-py_1
jedi conda-forge/linux-64::jedi-0.13.3-py37_0
jpeg conda-forge/linux-64::jpeg-9c-h14c3975_1001
json-c conda-forge/linux-64::json-c-0.13.1-h14c3975_1001
kealib conda-forge/linux-64::kealib-1.4.10-h1978553_1003
kiwisolver conda-forge/linux-64::kiwisolver-1.0.1-py37h6bb024c_1002
krb5 conda-forge/linux-64::krb5-1.16.3-hc83ff2d_1000
libblas conda-forge/linux-64::libblas-3.8.0-4_openblas
libcblas conda-forge/linux-64::libcblas-3.8.0-4_openblas
libcurl conda-forge/linux-64::libcurl-7.64.0-h01ee5af_0
libdap4 conda-forge/linux-64::libdap4-3.19.1-hd48c02d_1000
libedit conda-forge/linux-64::libedit-3.1.20170329-hf8c457e_1001
libffi conda-forge/linux-64::libffi-3.2.1-he1b5a44_1006
libgcc-ng pkgs/main/linux-64::libgcc-ng-8.2.0-hdf63c60_1
libgdal conda-forge/linux-64::libgdal-2.4.0-h982c1cc_1002
libgfortran-ng pkgs/main/linux-64::libgfortran-ng-7.3.0-hdf63c60_0
libiconv conda-forge/linux-64::libiconv-1.15-h516909a_1005
libkml conda-forge/linux-64::libkml-1.3.0-h328b03d_1009
liblapack conda-forge/linux-64::liblapack-3.8.0-4_openblas
libnetcdf conda-forge/linux-64::libnetcdf-4.6.2-hbdf4f91_1001
libpng conda-forge/linux-64::libpng-1.6.36-h84994c4_1000
libpq conda-forge/linux-64::libpq-10.6-h13b8bad_1000
libspatialindex conda-forge/linux-64::libspatialindex-1.9.0-he1b5a44_0
libspatialite conda-forge/linux-64::libspatialite-4.3.0a-hb5ec416_1026
libssh2 conda-forge/linux-64::libssh2-1.8.0-h1ad7b7a_1003
libstdcxx-ng pkgs/main/linux-64::libstdcxx-ng-8.2.0-hdf63c60_1
libtiff conda-forge/linux-64::libtiff-4.0.10-h9022e91_1002
libuuid conda-forge/linux-64::libuuid-2.32.1-h14c3975_1000
libxcb conda-forge/linux-64::libxcb-1.13-h14c3975_1002
libxml2 conda-forge/linux-64::libxml2-2.9.8-h143f9aa_1005
libxslt conda-forge/linux-64::libxslt-1.1.32-h4785a14_1002
lxml conda-forge/linux-64::lxml-4.3.2-py37h23eabaa_0
mapclassify conda-forge/noarch::mapclassify-2.0.1-py_0
matplotlib conda-forge/linux-64::matplotlib-3.0.3-py37_0
matplotlib-base conda-forge/linux-64::matplotlib-base-3.0.3-py37h167e16e_0
munch conda-forge/noarch::munch-2.3.2-py_0
ncurses conda-forge/linux-64::ncurses-6.1-hf484d3e_1002
numpy conda-forge/linux-64::numpy-1.16.2-py37h8b7e671_1
olefile conda-forge/noarch::olefile-0.46-py_0
openblas conda-forge/linux-64::openblas-0.3.5-h9ac9557_1001
openjpeg conda-forge/linux-64::openjpeg-2.3.0-hf38bd82_1003
openssl conda-forge/linux-64::openssl-1.0.2r-h14c3975_0
owslib conda-forge/noarch::owslib-0.17.1-py_0
pandas conda-forge/linux-64::pandas-0.24.2-py37hf484d3e_0
pango conda-forge/linux-64::pango-1.40.14-h4ea9474_1004
parso conda-forge/noarch::parso-0.3.4-py_0
pcre conda-forge/linux-64::pcre-8.41-hf484d3e_1003
pexpect conda-forge/linux-64::pexpect-4.6.0-py37_1000
pickleshare conda-forge/linux-64::pickleshare-0.7.5-py37_1000
pillow conda-forge/linux-64::pillow-5.4.1-py37h00a061d_1000
pip conda-forge/linux-64::pip-19.0.3-py37_0
pixman conda-forge/linux-64::pixman-0.34.0-h14c3975_1003
poppler conda-forge/linux-64::poppler-0.67.0-h2ad7f00_6
poppler-data conda-forge/noarch::poppler-data-0.4.9-1
postgresql conda-forge/linux-64::postgresql-10.6-h66cca7a_1000
proj4 conda-forge/linux-64::proj4-5.2.0-h14c3975_1001
prompt_toolkit conda-forge/noarch::prompt_toolkit-2.0.9-py_0
pthread-stubs conda-forge/linux-64::pthread-stubs-0.4-h14c3975_1001
ptyprocess conda-forge/linux-64::ptyprocess-0.6.0-py37_1000
pycparser conda-forge/linux-64::pycparser-2.19-py37_1
pyepsg conda-forge/noarch::pyepsg-0.4.0-py_0
pygments conda-forge/noarch::pygments-2.3.1-py_0
pykdtree conda-forge/linux-64::pykdtree-1.3.1-py37h3010b51_1002
pyopenssl conda-forge/linux-64::pyopenssl-19.0.0-py37_0
pyparsing conda-forge/noarch::pyparsing-2.3.1-py_0
pyproj conda-forge/linux-64::pyproj-1.9.6-py37hc0953d3_1000
pyqt conda-forge/linux-64::pyqt-5.6.0-py37h13b7fb3_1008
pyshp conda-forge/noarch::pyshp-2.1.0-py_0
pysocks conda-forge/linux-64::pysocks-1.6.8-py37_1002
python conda-forge/linux-64::python-3.7.1-hd21baee_1001
python-dateutil conda-forge/noarch::python-dateutil-2.8.0-py_0
pytz conda-forge/noarch::pytz-2018.9-py_0
qt conda-forge/linux-64::qt-5.6.2-hce4f676_1013
readline conda-forge/linux-64::readline-7.0-hf8c457e_1001
requests conda-forge/linux-64::requests-2.21.0-py37_1000
rtree conda-forge/linux-64::rtree-0.8.3-py37h666c49c_1002
scipy conda-forge/linux-64::scipy-1.2.1-py37h09a28d5_1
setuptools conda-forge/linux-64::setuptools-40.8.0-py37_0
shapely conda-forge/linux-64::shapely-1.6.4-py37h2afed24_1003
sip conda-forge/linux-64::sip-4.18.1-py37hf484d3e_1000
six conda-forge/linux-64::six-1.12.0-py37_1000
sqlite conda-forge/linux-64::sqlite-3.26.0-h67949de_1001
tk conda-forge/linux-64::tk-8.6.9-h84994c4_1000
tornado conda-forge/linux-64::tornado-6.0.2-py37h516909a_0
traitlets conda-forge/linux-64::traitlets-4.3.2-py37_1000
tzcode conda-forge/linux-64::tzcode-2018g-h14c3975_1001
urllib3 conda-forge/linux-64::urllib3-1.24.1-py37_1000
wcwidth conda-forge/noarch::wcwidth-0.1.7-py_1
wheel conda-forge/linux-64::wheel-0.33.1-py37_0
xerces-c conda-forge/linux-64::xerces-c-3.2.2-hac72e42_1001
xorg-kbproto conda-forge/linux-64::xorg-kbproto-1.0.7-h14c3975_1002
xorg-libice conda-forge/linux-64::xorg-libice-1.0.9-h516909a_1004
xorg-libsm conda-forge/linux-64::xorg-libsm-1.2.3-h84519dc_1000
xorg-libx11 conda-forge/linux-64::xorg-libx11-1.6.7-h14c3975_1000
xorg-libxau conda-forge/linux-64::xorg-libxau-1.0.9-h14c3975_0
xorg-libxdmcp conda-forge/linux-64::xorg-libxdmcp-1.1.3-h516909a_0
xorg-libxext conda-forge/linux-64::xorg-libxext-1.3.4-h516909a_0
xorg-libxrender conda-forge/linux-64::xorg-libxrender-0.9.10-h516909a_1002
xorg-libxt conda-forge/linux-64::xorg-libxt-1.1.5-h14c3975_1002
xorg-renderproto conda-forge/linux-64::xorg-renderproto-0.11.1-h14c3975_1002
xorg-xextproto conda-forge/linux-64::xorg-xextproto-7.3.0-h14c3975_1002
xorg-xproto conda-forge/linux-64::xorg-xproto-7.0.31-h14c3975_1007
xz conda-forge/linux-64::xz-5.2.4-h14c3975_1001
zlib conda-forge/linux-64::zlib-1.2.11-h14c3975_1004
zstd conda-forge/linux-64::zstd-1.3.3-1
Proceed ([y]/n)? n
Exiting.
from mamba.
jorisvandenbossche
commented on May 18, 2024
Actually, up to now I only looked at what mamba proposed, but now trying to actually create the environment, I get an error for the example above:
...
Proceed ([y]/n)? y
Preparing transaction: done
Verifying transaction: done
Executing transaction: failed
ERROR conda.core.link:_execute(568): An error occurred while installing package 'conda-forge::attrs-19.1.0-py_0'.
FileNotFoundError(2, "No such file or directory: '/home/joris/miniconda3/envs/mamba-geo-test/bin/python3.7'")
Attempting to roll back.
Rolling back transaction: done
[Errno 2] No such file or directory: '/home/joris/miniconda3/envs/mamba-geo-test/bin/python3.7': '/home/joris/miniconda3/envs/mamba-geo-test/bin/python3.7'
And the rolling back also didn't fully succeed, as the envs/mamba-geo-test dir still has a conda-meta subdir with the file asn1crypto-0.24.0-py37_1003.json in it.
Doing the same with conda properly creates the environment.
from mamba.
wolfv
commented on May 18, 2024
Hi Joris, great! Happy to hear that :)
Indeed, I think it's due to how I implemented version comparison that sometimes the default channel "wins" where conda-forge should win. Luckily the guys over at libsolv have already implemented a special version comparison function for conda: openSUSE/libsolv@67d113f which will definitely help getting the same results!
from mamba.
wolfv
commented on May 18, 2024
hmm interesting! I didn't observe that specific problem yet. One idea I have is that we need to install pip (which I think is something that conda automatically adds). Otherwise I wouldn't know what the difference between conda and mamba at this stage is...
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jorisvandenbossche
commented on May 18, 2024
I get the same error when explicitly adding pip to the required packages (mamba create -n mamba-geo-test python geopandas cartopy ipython pip
I have a add_pip_as_python_dependency config set to True, so that is the reason that the conda version also installs pip (and mamba does not yet follow that config)
from mamba.
Related Issues (20)
- 1.5.8 release HOT 1
- Feature request: a standalone tool, unpack a .conda package of an env dir on the fly, then exec a extracted bin/binary
- memba install errors
- v2: Do not load `.tar.bz2` record if there's a `.conda` artifact counterpart HOT 2
- [feature] download packages without extracting... `--download-without-extracting`?
- Mamba keep downloading the repodata for every install
- Different behavior of `conda` and `mamba` installing when dependencies are already installed via `pip`
- Add more condarc locations from Conda standard.
- Problem installing/finding packages
- Not able to activate with mamba activate
- No output about installed packages
- Empty shell name in xonsh
- `UnSolvable.explain_problems()` fails if the conflict involves a pinned package and the request has `flags.allow_uninstall=False`
- miniforge3/bin/conda shebang points to wrong python
- v2: Ctrl+C / SIGINT / KeyboardInterrupt handling not working HOT 13
- Restore alphbetized package listing order when installing (or at least allow this via config option) HOT 2
- Faster/efficient alternative to conda build HOT 2
- url redirect in channel_alias makes the cache invalid
- Implement CEP-15 `base_url` (repodata_version: 2)
- Digital signatures HOT 1
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