Comments (2)
After debugging for long time, I found the problem.
in ckg/graphdb_connector/connector.py
def run_query(query, parameters={}):
driver = getGraphDatabaseConnectionConfiguration(configuration=None, database=None)
data = getCursorData(driver, query, parameters=parameters)
return data
this query is :
MATCH p=(project:Project)-[:HAS_ENROLLED]->(:Subject)-[:BELONGS_TO_SUBJECT]-(:Biological_sample)-[:SPLITTED_INTO]->(a:Analytical_sample)-[r:HAS_QUANTIFIED_PROTEIN]->(protein:Protein) WHERE project.id="P0000001" AND toBoolean(r.is_razor) RETURN a.external_id AS name, a.external_id AS x,COUNT(DISTINCT(protein.id)) AS y, a.group AS group ORDER BY group;
I use this cypher in neo4j, and the result is none. Next, I click 'project' node to find 'P0000001', then find the problem is 'HAS_QUANTIFIED_PROTEIN' relationship disappeared!
Before I uploaded data to the project p0000001 on ckgapp , which may destroy the relationships in the database.
So I reimported the neo4j dump file for verification, and it succeeded.
This platform is very comprehensive and perfect!Thank you for your open source code, which is worth learning!
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I am also using CKG. Are you interested in communicating? If so, please contact [email protected]
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