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Name: Marcel Beining
Type: User
Name: Marcel Beining
Type: User
This repository comprises the scripts used to create the morphological model of perinatally- and adult-born dentate gyrus granule cells of mouse and rat, which is part of the paper Beining, M., Jungenitz, T., Radic, T. et al. Brain Struct Funct (2017) 222: 1427. https://doi.org/10.1007/s00429-016-1285-y
This detailed and robust compartmental model accompanies the manuscript Beining et al (2017): T2N as a new tool for robust electrophysiological modeling demonstrated for mature and adult-born dentate granule cells. eLife
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This is a set of functions making nice figures in Matlab more easy
This small graphical user interface helps to map the anatomical borders of dentate gyrus in an imaged volume onto morphologies that had been reconstructed in that volume.
T2N is an extension of the TREES toolbox providing an interface between Matlab and the compartmental modeling environment NEURON. It was published in (and should be cited this way): Beining M, Mongiat, LA, Schwarzacher SW, Cuntz H, Jedlicka P: T2N as a new tool for robust electrophysiological modeling demonstrated for mature and adult-born dentate granule cells. eLife 2017; 6:e26517
TreeAdmin is a small Matlab extension to the TREES toolbox (www.treestoolbox.org). Its graphical user interface helps to view and categorize morphologies reconstructed with TREES toolbox.
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