markschl Goto Github PK
Name: Markus Schlegel
Type: User
Company: Swiss Federal Research Institute WSL
Markus Schlegel's Projects
arduino-wind-logger
Simple low-cost loggers for wind sensors
bio_scripts
Collection of simple scripts used for metabarcoding and other analyses
buffer-redux
A drop-in replacement for Rust's std::io::BufReader, with extra features
embed_krona
Krona charts in R(Studio)
exprtk_rs
Rust bindings to ExprTk (http://www.partow.net/programming/exprtk/)
newspublisher
Revolution version of NewsPublisher snippet
ngs-sample-tab
Helper script to create sample files for Next-Generation Sequencing (NGS) analysis pipelines
rust-bio
This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.
rust-bio-types
A library of common biomedical types.
seq_consensus
Alignment consensus in Python
seq_io
FASTA and FASTQ parsing in Rust
seqtool
Fast and flexible tool for reading, modifying and writing biological sequences
seqtool-docs
Documentation for https://github.com/markschl/seqtool
snakecharmer
Amplicon data processing workflows for diversity analysis
thread_io
Rust crate for performing I/O in background thread
uvsnake
USEARCH/VSEARCH-based pipeline for amplicon data processing
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