Comments (3)
download.file("http://dee2.io/cgi-bin/request.sh?org=celegans&x=SRR363798&x=SRR363799",destfile="dee2data.zip")
Under windows, the ZIP file is being called invalid. No such problem with the Unix version.
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Stack overflow to the rescue
https://stackoverflow.com/questions/48832672/download-file-produces-invalid-zip-file-on-windows-but-works-fine-on-mac
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this was due to the behaviour of download.file() in R trying to download as text file and not as binary. using the option mode="wb" fixed it
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Related Issues (20)
- prefetch error trying to run the docker container HOT 4
- Cannot access homo sapiens dataset on dee2.io HOT 2
- degust redirection is broken HOT 1
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- metadata HOT 2
- code/volunteer_pipeline.sh: line 17: [: ==: unary operator expected
- Getting the IP
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- Another problematic wget command to be fixed
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