Organism.identity and Organism.deme in genetic.py about dose HOT 4 CLOSED

For Organism.identity, a simple way is
Organism.identity = [random.choice(('1', '2', '3', '4', '5', '6', '7', '8', '9', 'A', 'B', 'C', 'D', 'E', 'F', 'G', 'H', 'I', 'J', 'K', 'L', 'M', 'N', 'O', 'P', 'Q', 'R', 'S', 'T', 'U', 'V', 'W', 'X', 'Y', 'Z', 'a', 'b', 'd', 'e', 'g', 'h', 'q', 'r', '=', '#', '$', '%', '&', '@', '<', '>', '?', '/', '', '|', ';', '-')) for x in range(32)]

That will give you a possibility of 57^32 (1e56) identities.

from dose.

At initiation, Organism.deme can take population name. Then it can be changed during simulation.

from dose.

Created methods to define 'identity' and 'deme' for every individual. Similar to deployment schemes, changes to such dictionary keys do not reflect on the final reports.

1. Organism.generate_name() function created to define a random 32-character value to an organism's status 'identity' dictionary key.
2. Spawn_populations(p) in dose.py now includes assigning of a 'deme' status to every individual after construction of populations. Takes the population name as default.

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Bug regarding incorrect identity and deme assignment now resolved. Problem was caused by genetic.py's Organism.clone(). Function does not properly deepcopy() the status dictionary of each organisms. It simply references all status dictionary of all organisms into one original dictionary. Reporting deme and identity now show the desired results. Was resolved by manually referencing each of the original organism to be cloned's status dictionary keys into the different clones. See genetic.py.

1. Deme of every individual is named according to the population's name.
2. Identity of every individual now varies according to it's randomly generated 32-char name.

from dose.