mazurowski-lab Goto Github PK

3d-breast-fgt-and-blood-vessel-segmentation

breastmri_styletransfer

Code for our paper "Deep Learning for Breast MRI Style Transfer with Limited Training Data".

contourdiff

Contour-Guided Diffusion Models for Unpaired Image-to-Image Translation

dbt-cancer-detection-algorithms

Library of lesion detection algorithm codebases from the DBTex Digital Breast Tomosynthesis Lesion Detection Challenge

dbtex-baseline

This is a baseline neural network model for breast tumor detection on the BCS-DBT dataset, to accompany the DBTex challenge.

duke-dbt-data

extensionsindex

Slicer extensions index

extensionsindexstable

Slicer extensions index

finetune-sam

This is an official repo for fine-tuning SAM to customized medical images.

intrinsic-properties

[ICLR 2024] Easy tools for measuring the label sharpness and intrinsic dimension of datasets and learned representations, which relate to model generalization and robustness.

knee_clf

mri-deeplearning-tutorial

Source code for my blog post tutorial about how to use deep learning on MR images.

mri-parameter-prediction

(MIDL 2023) Code for "Reverse Engineering Breast MRIs: Predicting Acquisition Parameters Directly from Images"

osteoarthritis-classification

this is a implementation for knee KL score prediction.

picard-anomalydetection

Pluralistic Image Completion for Anomaly Detection (Med. Image Anal. 2023)

radiologyintrinsicmanifolds

(MICCAI 2022) Code for "The Intrinsic Manifolds of Radiological Images and their Role in Deep Learning" (intrinsic dimensions)

segment-anything-medical-evaluation

Code for "Segment Anything Model for Medical Image Analysis: an Experimental Study" in Medical Image Analysis

segment-anything2-medical-evaluation

segmentanybone

SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI

segmentation-guided-diffusion

[MICCAI 2024] Easy diffusion models (optionally with segmentation guidance) for medical images and beyond.

single-image-test-time-adaptation

Single-image test-time domain adaptation for segmentation models.

slicerextensionsindex

Slicer extensions index

slicersegmenthumanbody

3D Slicer extension for SegmentAnyBone developed by Mazurowski Lab

slicersegmentwithsam

3D Slicer extension for Segment Anything Model (SAM) developed by Meta

supermask

swssl-for-anomaly-detection

SWSSL - Sliding window-based self-supervised learning for anomaly detection in high-resolution images (IEEE Trans. on Medical Imaging 2023)