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berkshelf

A Chef Cookbook manager

bioformats

Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment. Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.

chef-client

Development repository for Chef Client cookbook

chef-server-ingredient

Install Chef Server core or add-on packages from our repository via a custom resource

chefstyle

Pinned rubocop rules for chef client and related software

data-pack

Data downloader for Python

deepometry

Image classification for imaging flow cytometry.

eegah

ej

Helper module for working with Erlang terms representing JSON

flink

Apache Flink

homework

Code challenges by Ad Hoc LLC.

imagej-server

A RESTful web server for ImageJ [EXPERIMENTAL]

keras-microscopy

kitchen-vagrant

Vagrant driver for Kitchen

matplotlib

matplotlib: plotting with Python

mcquin.github.io

my dumb site

metabolism

mitchell

wakka chikka wakka chikka wakka chikka wakka chikka

na-css-fixes

I prefer the old css

notebooks

My personal jupyter notebook collection

odo

Data Migration for the Blaze Project

ohai

Ohai profiles your system and emits JSON

python-javabridge

Python wrapper for the Java Native Interface

recursion-cytohackathon-2017

2017 Cytomining hackathon challenge results

resource

Easier, More Powerful Chef Resources

scikit-image

Image Processing SciKit (Toolbox for SciPy)

skimage-tutorials

Scikit-image tutorials

test-kitchen

Test Kitchen is an integration tool for developing and testing infrastructure code and software on isolated target platforms.

trackpy

Python particle tracking toolkit

winbox

Chef recipe for developer workstation for Windows