Comments (4)
I prefer to inherit your targeted Python class and override the __init__
method.
from medmnist.
data_flag = 'chestmnist'
download = True
classes=2
NUM_EPOCHS = 3
BATCH_SIZE = 128
lr = 0.001
info = INFO[data_flag]
task = info['task']
n_channels = info['n_channels']
n_classes = len(info['label'])
DataClass = getattr(medmnist, info['python_class'])
# preprocessing
data_transform = transforms.Compose([
transforms.ToTensor(),
transforms.Normalize(mean=[.5], std=[.5])
])
# load the data
train_dataset = DataClass(split='train', transform=data_transform, download=download,)
test_dataset = DataClass(split='test', transform=data_transform, download=download)
pil_dataset = DataClass(split='train', download=download)
# encapsulate data into dataloader form
train_loader = data.DataLoader(dataset=train_dataset, batch_size=BATCH_SIZE, shuffle=True)
train_loader_at_eval = data.DataLoader(dataset=train_dataset, batch_size=2*BATCH_SIZE, shuffle=False)
test_loader = data.DataLoader(dataset=test_dataset, batch_size=2*BATCH_SIZE, shuffle=False)
Here are you talking about below "DataClass"
DataClass = getattr(medmnist, info['python_class'])
from medmnist.
Indeed
from medmnist.
import numpy as np
# Load the .npz file
data = np.load('chestmnist.npz')
# Get the names of the arrays in the file
array_names = data.files
# Create an empty dictionary to store the arrays
arrays_dict = {}
# Iterate over the array names and store the arrays in the dictionary
for name in array_names:
arrays_dict[name] = data[name]
['train_images', 'val_images', 'test_images', 'train_labels', 'val_labels', 'test_labels']
here the order of image values and labels are in same order of index?
Could I pick some train lables and get the train_images with same index would it match?
from medmnist.
Related Issues (20)
- all images download as .npz
- Encountering `BadZipFile` Bug When Loading `pathmnist.npz` Locally HOT 2
- Request for preprocessing code HOT 2
- How to use the latest 64, 128 and 224 version of dataset with data_flag without downloading externally? HOT 2
- download by Command Line Tools | Something went wrong when downloading HOT 4
- Benchmark about Medmnist+ HOT 3
- How to visualise data without montage? HOT 2
- Easy way to combine datasets? HOT 2
- Question about chestmnist dataset HOT 2
- Citation to PneumoniaMNIST original source HOT 1
- Labelling vs ground truth HOT 2
- Where can I find sample IDs? HOT 2
- Custom Dataset Usage HOT 1
- What is the command line code to download one specific dataset? HOT 2
- About "getting_started.ipynb" HOT 4
- CHESTMNIST Dataset Shape HOT 1
- Labels in Organ{A,C,S}MNIST HOT 1
- pil_dataset is not used HOT 1
- transform not working? HOT 2
- Create a custom class like PathMNIST with custom data. HOT 1
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from medmnist.