metaspace2020 Goto Github PK
Name: METASPACE
Type: Organization
Bio: Scientific project on metabolite annotation of big data from imaging mass spectrometry
Location: EMBL, Heidelberg, Germany
Blog: http://metaspace2020.eu
Name: METASPACE
Type: Organization
Bio: Scientific project on metabolite annotation of big data from imaging mass spectrometry
Location: EMBL, Heidelberg, Germany
Blog: http://metaspace2020.eu
helper webapp for SCiLS export to METASPACE
Methods for measuring co-localization of ion images
Simulation of HR imaging mass spectrometry data
Lithops-based Serverless implementation of the METASPACE spatial metabolomics annotation pipeline
Metadata for imaging mass spectrometry
Cloud engine and platform for metabolite annotation for imaging mass spectrometry
Download and Convert METASPACE datasets to common formats such as AnnData or SpatialData
Main website of the METASPACE project
Project to develop methods to recognize off-sample mass spectrometry images
Tools for parsing public databases for inclusion in METASPACE
Metaspace pixel annotation export snapshots
Utilities for working with annotations
Engine for metabolite annotation for imaging mass spectrometry
Setting up cloud infrastructure for the engine using Ansible
GraphQL server for communication between the frontend and the backend
Prototype for the evaluation server (not ready).
Unified REST API for molecular database data
[OBSOLETE]
Frontend of METASPACE web application
Results of a community survey on imaging mass spectrometry in 2015
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