Segmentation Fault about nmgs HOT 2 OPEN

Hi Ramiro,

Hope you are well! This may be related to the file size in fact, maybe try:

#define MAX_LINE_LENGTH 10000

changing this constant in the NMGS.h header to say 100 times bigger. Otherwise it is an issue with the construction of the Stirling matrix. What you could try for that is subsampling down your data with rarefaction to reduce the size of the problem. It is probably a good idea to always rarefy down to the size of the smallest sample anyway.

Best Wishes,
Chris

from nmgs.

Hi Ramiro,

I had the same issue, and in my case it turned out to be just the length of the labels (of the samples in this case) --they were too long--, after reducing the name it works normally.

Best wishes,

Alberto

from nmgs.