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microbma's Projects

asgenedb icon asgenedb

A manually curated arsenic functional gene database (AsgeneDB) was developed for rapid and accurate metagenomic analysis.

bionps icon bionps

Biodiversity in National Parks is an app that let you visualize Kaggle's biodiversity dataset.

cobratoolbox icon cobratoolbox

The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:

earthnetwork icon earthnetwork

Microbial co-occurrence network inferred from Earth Microbiome Project

genenet icon genenet

A project of genetic network for forest soil metagenomes

global-soil-virome icon global-soil-virome

Supporting code for manuscript: "Ecological/environmental drivers of global soil virome diversity"

krona icon krona

Interactively explore metagenomes and more from a web browser.

neten icon neten

Network enhancement R script

particles icon particles

Super slim Jekyll Theme created for math posts with easy mermaid diagram

qmp icon qmp

Quantitative Microbiome Profiling

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