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4h-record-books

Development mirror for the Albany County 4-H Record Book help website

act_docker_images

Docker images

beefblup

Scripts and spreadsheets for performing single-variate Best Linear Unbiased Predictor (BLUP) to find beef cattle breeding values #KeepEPDsReal

bioalignments.jl

Sequence alignment tools

bioconda-recipes

Conda recipes for the bioconda channel.

biosyntax

Syntax highlighting for computational biology

chocolatey-packages

Chocolatey packages for software I like that weren't already there

cowcalf-rumen-metagenomic-pipeline

An end-to-end script to convert Illumina shotgun sequences and metadata into full-blown diversity tables and visualizations.

cowsay-cows

cowfiles in the original spirit of cowsay, except that all of these are actually bovine

cowsay.jl

:cow2: cowsay for Julia!

docker-biojulia

BioJulia in a Docker image

docker-juliapro

docker-names

A docker name generator in TypeScript.

dotfiles

My shell configuration as implemented by https://github.com/twpayne/chezmoi

haplink.jl

Viral haplotype calling by linkage disequilibrium

indexes.jl

kelpie.jl

:dog2: I accidentally built an HTML templating engine in Julia

logseq-awesome-links

⭐ Favicons for external links, page icons for internal. Logseq pluign

logseq-graph-analysis

learn more about the relationships between between your notes using network analysis algorithms

nf-configs

Config files used to define parameters specific to compute environments at different Institutions

nf-core_modules

Repository to host tool-specific module files for the Nextflow DSL2 community!

nf-core_taxprofiler

Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data

nf-core_tools

Python package with helper tools for the nf-core community.

nfdocs-parser

A Sphinx plugin for converting Nextflow docstrings into documentation

rumensimulation.jl

sc2-sequencing

File manipulation/bioinformatics-type scripts that my colleagues have found useful in sequencing SARS-CoV2 (SC2).

sequencevariation.jl

Biological sequence variation

singularity-builds

unifac.jl

Activity coefficient calculator using the UNIFAC method

uwmath2205-si-fall18

Holds the files for the SI website for University of Wyoming's Supplemental Instruction for MATH 2205 Calculus II in the fall of 2018